The first complete chloroplast genome of Hylomecon japonica and its phylogenetic position within Papaveraceae

Hylomecon japonica, a widespread species in East Asia, is a valuable horticultural and medicinal plant. Here, we obtained the first complete sequence of the H. japonica chloroplast genome. The complete cp genome was 160,011 bp long, with a large single-copy region (LSC, 88,165 bp) and a small single...

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Autores principales: Zhang, Yonghua, Lee, Joongku, Liu, Xuelian, Sun, Zhongshuai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687558/
https://www.ncbi.nlm.nih.gov/pubmed/33365538
http://dx.doi.org/10.1080/23802359.2019.1573125
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author Zhang, Yonghua
Lee, Joongku
Liu, Xuelian
Sun, Zhongshuai
author_facet Zhang, Yonghua
Lee, Joongku
Liu, Xuelian
Sun, Zhongshuai
author_sort Zhang, Yonghua
collection PubMed
description Hylomecon japonica, a widespread species in East Asia, is a valuable horticultural and medicinal plant. Here, we obtained the first complete sequence of the H. japonica chloroplast genome. The complete cp genome was 160,011 bp long, with a large single-copy region (LSC, 88,165 bp) and a small single copy region (SSC, 18,378 bp) separated by a pair of inverted repeats (IRs, 26,734 bp). The cp genome contained 114 unique genes, including 80 protein-coding genes, 30 tRNA genes, and four rRNA genes. The phylogenetic analysis indicated that H. japonica is close related with Coreanomecon hylomeconoides.
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spelling pubmed-76875582020-12-22 The first complete chloroplast genome of Hylomecon japonica and its phylogenetic position within Papaveraceae Zhang, Yonghua Lee, Joongku Liu, Xuelian Sun, Zhongshuai Mitochondrial DNA B Resour Mitogenome Announcement Hylomecon japonica, a widespread species in East Asia, is a valuable horticultural and medicinal plant. Here, we obtained the first complete sequence of the H. japonica chloroplast genome. The complete cp genome was 160,011 bp long, with a large single-copy region (LSC, 88,165 bp) and a small single copy region (SSC, 18,378 bp) separated by a pair of inverted repeats (IRs, 26,734 bp). The cp genome contained 114 unique genes, including 80 protein-coding genes, 30 tRNA genes, and four rRNA genes. The phylogenetic analysis indicated that H. japonica is close related with Coreanomecon hylomeconoides. Taylor & Francis 2019-07-12 /pmc/articles/PMC7687558/ /pubmed/33365538 http://dx.doi.org/10.1080/23802359.2019.1573125 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Zhang, Yonghua
Lee, Joongku
Liu, Xuelian
Sun, Zhongshuai
The first complete chloroplast genome of Hylomecon japonica and its phylogenetic position within Papaveraceae
title The first complete chloroplast genome of Hylomecon japonica and its phylogenetic position within Papaveraceae
title_full The first complete chloroplast genome of Hylomecon japonica and its phylogenetic position within Papaveraceae
title_fullStr The first complete chloroplast genome of Hylomecon japonica and its phylogenetic position within Papaveraceae
title_full_unstemmed The first complete chloroplast genome of Hylomecon japonica and its phylogenetic position within Papaveraceae
title_short The first complete chloroplast genome of Hylomecon japonica and its phylogenetic position within Papaveraceae
title_sort first complete chloroplast genome of hylomecon japonica and its phylogenetic position within papaveraceae
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687558/
https://www.ncbi.nlm.nih.gov/pubmed/33365538
http://dx.doi.org/10.1080/23802359.2019.1573125
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