The complete chloroplast genome of Hemerocallis Fulva

We have sequenced the complete chloroplast genome of Hemerocallis fulva, a species of the Asphodelaceae family, through Illumina HiSeq paired-end sequencing. The total size of chloroplast genome of Hemerocallis fulva was 155,855 bp with a large single-copy (LSC) region of 84,607 bp, a small single-c...

Descripción completa

Detalles Bibliográficos
Autores principales: Lee, Junki, Lim, Jong-Sung, Kim, So-Yeon, Chun, Hyang Sook, Lee, Dongho, Nah, Gyoungju
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687569/
https://www.ncbi.nlm.nih.gov/pubmed/33365473
http://dx.doi.org/10.1080/23802359.2019.1624214
_version_ 1783613549719846912
author Lee, Junki
Lim, Jong-Sung
Kim, So-Yeon
Chun, Hyang Sook
Lee, Dongho
Nah, Gyoungju
author_facet Lee, Junki
Lim, Jong-Sung
Kim, So-Yeon
Chun, Hyang Sook
Lee, Dongho
Nah, Gyoungju
author_sort Lee, Junki
collection PubMed
description We have sequenced the complete chloroplast genome of Hemerocallis fulva, a species of the Asphodelaceae family, through Illumina HiSeq paired-end sequencing. The total size of chloroplast genome of Hemerocallis fulva was 155,855 bp with a large single-copy (LSC) region of 84,607 bp, a small single-copy (SSC) region of 18,508 bp, and a pair of identical inverted repeat regions (IRs) of 26,370 bp. The genome contained a total of 112 genes, including 79 protein-coding genes, 29 transfer RNA (tRNA) genes, and 4 ribosomal RNA (rRNA) genes. The phylogenetic analysis of Hemerocallis fulva with 10 related species exhibited the closest taxonomical relationship with Aloe species in the Asphodelaceae family.
format Online
Article
Text
id pubmed-7687569
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-76875692020-12-22 The complete chloroplast genome of Hemerocallis Fulva Lee, Junki Lim, Jong-Sung Kim, So-Yeon Chun, Hyang Sook Lee, Dongho Nah, Gyoungju Mitochondrial DNA B Resour Mitogenome Announcement We have sequenced the complete chloroplast genome of Hemerocallis fulva, a species of the Asphodelaceae family, through Illumina HiSeq paired-end sequencing. The total size of chloroplast genome of Hemerocallis fulva was 155,855 bp with a large single-copy (LSC) region of 84,607 bp, a small single-copy (SSC) region of 18,508 bp, and a pair of identical inverted repeat regions (IRs) of 26,370 bp. The genome contained a total of 112 genes, including 79 protein-coding genes, 29 transfer RNA (tRNA) genes, and 4 ribosomal RNA (rRNA) genes. The phylogenetic analysis of Hemerocallis fulva with 10 related species exhibited the closest taxonomical relationship with Aloe species in the Asphodelaceae family. Taylor & Francis 2019-07-11 /pmc/articles/PMC7687569/ /pubmed/33365473 http://dx.doi.org/10.1080/23802359.2019.1624214 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by-nc/4.0/
spellingShingle Mitogenome Announcement
Lee, Junki
Lim, Jong-Sung
Kim, So-Yeon
Chun, Hyang Sook
Lee, Dongho
Nah, Gyoungju
The complete chloroplast genome of Hemerocallis Fulva
title The complete chloroplast genome of Hemerocallis Fulva
title_full The complete chloroplast genome of Hemerocallis Fulva
title_fullStr The complete chloroplast genome of Hemerocallis Fulva
title_full_unstemmed The complete chloroplast genome of Hemerocallis Fulva
title_short The complete chloroplast genome of Hemerocallis Fulva
title_sort complete chloroplast genome of hemerocallis fulva
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687569/
https://www.ncbi.nlm.nih.gov/pubmed/33365473
http://dx.doi.org/10.1080/23802359.2019.1624214
work_keys_str_mv AT leejunki thecompletechloroplastgenomeofhemerocallisfulva
AT limjongsung thecompletechloroplastgenomeofhemerocallisfulva
AT kimsoyeon thecompletechloroplastgenomeofhemerocallisfulva
AT chunhyangsook thecompletechloroplastgenomeofhemerocallisfulva
AT leedongho thecompletechloroplastgenomeofhemerocallisfulva
AT nahgyoungju thecompletechloroplastgenomeofhemerocallisfulva
AT leejunki completechloroplastgenomeofhemerocallisfulva
AT limjongsung completechloroplastgenomeofhemerocallisfulva
AT kimsoyeon completechloroplastgenomeofhemerocallisfulva
AT chunhyangsook completechloroplastgenomeofhemerocallisfulva
AT leedongho completechloroplastgenomeofhemerocallisfulva
AT nahgyoungju completechloroplastgenomeofhemerocallisfulva

Ejemplares similares