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Complete plastome sequence of Torenia concolor Lindley (Linderniaceae): an ornamental herb
In this study we firstly reported the complete chloroplast genome of Torenia concolor, a species of Linderniaceae. The complete chloroplast genome of T. concolor is 153,853 bp in length with a typical quadripartite structure, consisting of a large single-copy region (LSC, 85,446 bp), a single-copy r...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687577/ https://www.ncbi.nlm.nih.gov/pubmed/33365520 http://dx.doi.org/10.1080/23802359.2019.1627949 |
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author | Cheng, Xia-Lan Li, Hai-Li Wang, Hong-Xin Nizamani, Mir Mohammad Chen, Yan |
author_facet | Cheng, Xia-Lan Li, Hai-Li Wang, Hong-Xin Nizamani, Mir Mohammad Chen, Yan |
author_sort | Cheng, Xia-Lan |
collection | PubMed |
description | In this study we firstly reported the complete chloroplast genome of Torenia concolor, a species of Linderniaceae. The complete chloroplast genome of T. concolor is 153,853 bp in length with a typical quadripartite structure, consisting of a large single-copy region (LSC, 85,446 bp), a single-copy region (SSC, 18,837 bp), and a pair of inverted repeats (IRs, 24,785 bp). There are 114 genes annotated, including 80 unique protein-coding genes, 4 unique ribosomal RNA genes, and 30 transfer RNA genes. To investigate the evolution status of T. concolor, as well as Linderniaceae, we constructed a phylogenetic tree with T. concolor and other 16 species based on their complete chloroplast genomes. According to the phylogenetic topologies, T. concolor was closely related to Pedicularis hallaisanensis. |
format | Online Article Text |
id | pubmed-7687577 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-76875772020-12-22 Complete plastome sequence of Torenia concolor Lindley (Linderniaceae): an ornamental herb Cheng, Xia-Lan Li, Hai-Li Wang, Hong-Xin Nizamani, Mir Mohammad Chen, Yan Mitochondrial DNA B Resour Mitogenome Announcement In this study we firstly reported the complete chloroplast genome of Torenia concolor, a species of Linderniaceae. The complete chloroplast genome of T. concolor is 153,853 bp in length with a typical quadripartite structure, consisting of a large single-copy region (LSC, 85,446 bp), a single-copy region (SSC, 18,837 bp), and a pair of inverted repeats (IRs, 24,785 bp). There are 114 genes annotated, including 80 unique protein-coding genes, 4 unique ribosomal RNA genes, and 30 transfer RNA genes. To investigate the evolution status of T. concolor, as well as Linderniaceae, we constructed a phylogenetic tree with T. concolor and other 16 species based on their complete chloroplast genomes. According to the phylogenetic topologies, T. concolor was closely related to Pedicularis hallaisanensis. Taylor & Francis 2019-07-11 /pmc/articles/PMC7687577/ /pubmed/33365520 http://dx.doi.org/10.1080/23802359.2019.1627949 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Cheng, Xia-Lan Li, Hai-Li Wang, Hong-Xin Nizamani, Mir Mohammad Chen, Yan Complete plastome sequence of Torenia concolor Lindley (Linderniaceae): an ornamental herb |
title | Complete plastome sequence of Torenia concolor Lindley (Linderniaceae): an ornamental herb |
title_full | Complete plastome sequence of Torenia concolor Lindley (Linderniaceae): an ornamental herb |
title_fullStr | Complete plastome sequence of Torenia concolor Lindley (Linderniaceae): an ornamental herb |
title_full_unstemmed | Complete plastome sequence of Torenia concolor Lindley (Linderniaceae): an ornamental herb |
title_short | Complete plastome sequence of Torenia concolor Lindley (Linderniaceae): an ornamental herb |
title_sort | complete plastome sequence of torenia concolor lindley (linderniaceae): an ornamental herb |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687577/ https://www.ncbi.nlm.nih.gov/pubmed/33365520 http://dx.doi.org/10.1080/23802359.2019.1627949 |
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