The complete chloroplast genome of Juniperus squamata (Cupressaceae), a shrubby conifer from Asian Mountains

The complete chloroplast genome of Juniperus squamata, a shrubby conifer of ornamental value, is determined in this study. The complete chloroplast genome size is 127,792 bp in length. The genome contains 118 genes, including 82 protein-coding genes, 32 transfer RNA genes, and four ribosomal RNA gen...

Descripción completa

Detalles Bibliográficos
Autores principales: Xie, Siyu, Li, Jialiang, Miao, Jibin, Xu, Jingjing, Mao, Kangshan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687591/
https://www.ncbi.nlm.nih.gov/pubmed/33365443
http://dx.doi.org/10.1080/23802359.2019.1623105
_version_ 1783613554815926272
author Xie, Siyu
Li, Jialiang
Miao, Jibin
Xu, Jingjing
Mao, Kangshan
author_facet Xie, Siyu
Li, Jialiang
Miao, Jibin
Xu, Jingjing
Mao, Kangshan
author_sort Xie, Siyu
collection PubMed
description The complete chloroplast genome of Juniperus squamata, a shrubby conifer of ornamental value, is determined in this study. The complete chloroplast genome size is 127,792 bp in length. The genome contains 118 genes, including 82 protein-coding genes, 32 transfer RNA genes, and four ribosomal RNA genes (16S ribosomal RNA, 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA). It does not contain inverted repeat (IR) sequence. The overall GC content of J. squamata cpDNA is 35.1%. The phylogenetic analysis suggests its close relationship with J. recurva and J. tibetica from Himalaya and the Qinghai-Tibet Plateau, respectively. The genome may contribute to evolutionary studies of conifers.
format Online
Article
Text
id pubmed-7687591
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-76875912020-12-22 The complete chloroplast genome of Juniperus squamata (Cupressaceae), a shrubby conifer from Asian Mountains Xie, Siyu Li, Jialiang Miao, Jibin Xu, Jingjing Mao, Kangshan Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome of Juniperus squamata, a shrubby conifer of ornamental value, is determined in this study. The complete chloroplast genome size is 127,792 bp in length. The genome contains 118 genes, including 82 protein-coding genes, 32 transfer RNA genes, and four ribosomal RNA genes (16S ribosomal RNA, 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA). It does not contain inverted repeat (IR) sequence. The overall GC content of J. squamata cpDNA is 35.1%. The phylogenetic analysis suggests its close relationship with J. recurva and J. tibetica from Himalaya and the Qinghai-Tibet Plateau, respectively. The genome may contribute to evolutionary studies of conifers. Taylor & Francis 2019-07-12 /pmc/articles/PMC7687591/ /pubmed/33365443 http://dx.doi.org/10.1080/23802359.2019.1623105 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by-nc/4.0/
spellingShingle Mitogenome Announcement
Xie, Siyu
Li, Jialiang
Miao, Jibin
Xu, Jingjing
Mao, Kangshan
The complete chloroplast genome of Juniperus squamata (Cupressaceae), a shrubby conifer from Asian Mountains
title The complete chloroplast genome of Juniperus squamata (Cupressaceae), a shrubby conifer from Asian Mountains
title_full The complete chloroplast genome of Juniperus squamata (Cupressaceae), a shrubby conifer from Asian Mountains
title_fullStr The complete chloroplast genome of Juniperus squamata (Cupressaceae), a shrubby conifer from Asian Mountains
title_full_unstemmed The complete chloroplast genome of Juniperus squamata (Cupressaceae), a shrubby conifer from Asian Mountains
title_short The complete chloroplast genome of Juniperus squamata (Cupressaceae), a shrubby conifer from Asian Mountains
title_sort complete chloroplast genome of juniperus squamata (cupressaceae), a shrubby conifer from asian mountains
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687591/
https://www.ncbi.nlm.nih.gov/pubmed/33365443
http://dx.doi.org/10.1080/23802359.2019.1623105
work_keys_str_mv AT xiesiyu thecompletechloroplastgenomeofjuniperussquamatacupressaceaeashrubbyconiferfromasianmountains
AT lijialiang thecompletechloroplastgenomeofjuniperussquamatacupressaceaeashrubbyconiferfromasianmountains
AT miaojibin thecompletechloroplastgenomeofjuniperussquamatacupressaceaeashrubbyconiferfromasianmountains
AT xujingjing thecompletechloroplastgenomeofjuniperussquamatacupressaceaeashrubbyconiferfromasianmountains
AT maokangshan thecompletechloroplastgenomeofjuniperussquamatacupressaceaeashrubbyconiferfromasianmountains
AT xiesiyu completechloroplastgenomeofjuniperussquamatacupressaceaeashrubbyconiferfromasianmountains
AT lijialiang completechloroplastgenomeofjuniperussquamatacupressaceaeashrubbyconiferfromasianmountains
AT miaojibin completechloroplastgenomeofjuniperussquamatacupressaceaeashrubbyconiferfromasianmountains
AT xujingjing completechloroplastgenomeofjuniperussquamatacupressaceaeashrubbyconiferfromasianmountains
AT maokangshan completechloroplastgenomeofjuniperussquamatacupressaceaeashrubbyconiferfromasianmountains

Ejemplares similares