The complete chloroplast genome of an Endangered species Cymbidium Nanulum (Orchidaceae)

Cymbidium nanulum Y.S.Wu & S.C.Chen is an IUCN Red listed Endangered species and distributes in South-Central China and Hainan. Here, we report the complete chloroplast (cp) genome sequence and the cp genome features of C. nanulum. The complete chloroplast (cp) genome sequence of C. nanulum was...

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Autores principales: Zhang, Yong-Qiang, Li, Ting-Zhang, Huang, Jie, Chen, Gui-Zhen, Zhang, Guo-Qiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687592/
https://www.ncbi.nlm.nih.gov/pubmed/33365599
http://dx.doi.org/10.1080/23802359.2019.1638327
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author Zhang, Yong-Qiang
Li, Ting-Zhang
Huang, Jie
Chen, Gui-Zhen
Zhang, Guo-Qiang
author_facet Zhang, Yong-Qiang
Li, Ting-Zhang
Huang, Jie
Chen, Gui-Zhen
Zhang, Guo-Qiang
author_sort Zhang, Yong-Qiang
collection PubMed
description Cymbidium nanulum Y.S.Wu & S.C.Chen is an IUCN Red listed Endangered species and distributes in South-Central China and Hainan. Here, we report the complete chloroplast (cp) genome sequence and the cp genome features of C. nanulum. The complete chloroplast (cp) genome sequence of C. nanulum was 149,776 bp in length. It presented a typical quadripartite structure including one large single-copy region (LSC, 85,392 bp), one small single-copy region (SSC, 14,210 bp), and two inverted repeat regions (IRs, 25,087 bp). The cp genome encoded 133 genes, of which 104 were unique genes (77 protein-coding genes, 23 tRNAs, and 4 rRNAs). The maximum-likelihood phylogenetic analysis showed that C. nanulum was closely related to other species of genus Cymbidium.
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spelling pubmed-76875922020-12-22 The complete chloroplast genome of an Endangered species Cymbidium Nanulum (Orchidaceae) Zhang, Yong-Qiang Li, Ting-Zhang Huang, Jie Chen, Gui-Zhen Zhang, Guo-Qiang Mitochondrial DNA B Resour Mitogenome Announcement Cymbidium nanulum Y.S.Wu & S.C.Chen is an IUCN Red listed Endangered species and distributes in South-Central China and Hainan. Here, we report the complete chloroplast (cp) genome sequence and the cp genome features of C. nanulum. The complete chloroplast (cp) genome sequence of C. nanulum was 149,776 bp in length. It presented a typical quadripartite structure including one large single-copy region (LSC, 85,392 bp), one small single-copy region (SSC, 14,210 bp), and two inverted repeat regions (IRs, 25,087 bp). The cp genome encoded 133 genes, of which 104 were unique genes (77 protein-coding genes, 23 tRNAs, and 4 rRNAs). The maximum-likelihood phylogenetic analysis showed that C. nanulum was closely related to other species of genus Cymbidium. Taylor & Francis 2019-07-13 /pmc/articles/PMC7687592/ /pubmed/33365599 http://dx.doi.org/10.1080/23802359.2019.1638327 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Zhang, Yong-Qiang
Li, Ting-Zhang
Huang, Jie
Chen, Gui-Zhen
Zhang, Guo-Qiang
The complete chloroplast genome of an Endangered species Cymbidium Nanulum (Orchidaceae)
title The complete chloroplast genome of an Endangered species Cymbidium Nanulum (Orchidaceae)
title_full The complete chloroplast genome of an Endangered species Cymbidium Nanulum (Orchidaceae)
title_fullStr The complete chloroplast genome of an Endangered species Cymbidium Nanulum (Orchidaceae)
title_full_unstemmed The complete chloroplast genome of an Endangered species Cymbidium Nanulum (Orchidaceae)
title_short The complete chloroplast genome of an Endangered species Cymbidium Nanulum (Orchidaceae)
title_sort complete chloroplast genome of an endangered species cymbidium nanulum (orchidaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687592/
https://www.ncbi.nlm.nih.gov/pubmed/33365599
http://dx.doi.org/10.1080/23802359.2019.1638327
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