The complete chloroplast genome sequence of Lycium ruthenicum (Solanaceae), a traditional medicinal plant in China

Lycium ruthenicum, Known as a traditional medicinal plant in China, is distributed in the arid and semiarid areas of northwest China. In this study, we assembled the complete chloroplast (cp) genome of L. ruthenicum using data from high-throughput Illumina sequencing. The L. ruthenicum cp genome is...

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Autores principales: Wang, Cuiping, Jia, Guolun, Zhu, Lizhen, Tian, Fang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687596/
https://www.ncbi.nlm.nih.gov/pubmed/33365598
http://dx.doi.org/10.1080/23802359.2019.1638324
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author Wang, Cuiping
Jia, Guolun
Zhu, Lizhen
Tian, Fang
author_facet Wang, Cuiping
Jia, Guolun
Zhu, Lizhen
Tian, Fang
author_sort Wang, Cuiping
collection PubMed
description Lycium ruthenicum, Known as a traditional medicinal plant in China, is distributed in the arid and semiarid areas of northwest China. In this study, we assembled the complete chloroplast (cp) genome of L. ruthenicum using data from high-throughput Illumina sequencing. The L. ruthenicum cp genome is 154,979 bp in size and includes two inverted repeat regions of 25,395 bp each, which is separated by a large single copy region of 85,984 bp and a small single copy region of 18,205 bp. A total of 132 genes were predicted, including 37 tRNA, 8 rRNA, and 86 protein-coding genes. In addition, 9 PCG genes possess a single intron, 74 PCG genes no intron, and 3 other genes harbor two introns. 6 tRNA genes harbor a single intron. Phylogenetic analysis placed L. ruthenicum within the Solanaceae.
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spelling pubmed-76875962020-12-22 The complete chloroplast genome sequence of Lycium ruthenicum (Solanaceae), a traditional medicinal plant in China Wang, Cuiping Jia, Guolun Zhu, Lizhen Tian, Fang Mitochondrial DNA B Resour Mitogenome Announcement Lycium ruthenicum, Known as a traditional medicinal plant in China, is distributed in the arid and semiarid areas of northwest China. In this study, we assembled the complete chloroplast (cp) genome of L. ruthenicum using data from high-throughput Illumina sequencing. The L. ruthenicum cp genome is 154,979 bp in size and includes two inverted repeat regions of 25,395 bp each, which is separated by a large single copy region of 85,984 bp and a small single copy region of 18,205 bp. A total of 132 genes were predicted, including 37 tRNA, 8 rRNA, and 86 protein-coding genes. In addition, 9 PCG genes possess a single intron, 74 PCG genes no intron, and 3 other genes harbor two introns. 6 tRNA genes harbor a single intron. Phylogenetic analysis placed L. ruthenicum within the Solanaceae. Taylor & Francis 2019-07-13 /pmc/articles/PMC7687596/ /pubmed/33365598 http://dx.doi.org/10.1080/23802359.2019.1638324 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by-nc/4.0/
spellingShingle Mitogenome Announcement
Wang, Cuiping
Jia, Guolun
Zhu, Lizhen
Tian, Fang
The complete chloroplast genome sequence of Lycium ruthenicum (Solanaceae), a traditional medicinal plant in China
title The complete chloroplast genome sequence of Lycium ruthenicum (Solanaceae), a traditional medicinal plant in China
title_full The complete chloroplast genome sequence of Lycium ruthenicum (Solanaceae), a traditional medicinal plant in China
title_fullStr The complete chloroplast genome sequence of Lycium ruthenicum (Solanaceae), a traditional medicinal plant in China
title_full_unstemmed The complete chloroplast genome sequence of Lycium ruthenicum (Solanaceae), a traditional medicinal plant in China
title_short The complete chloroplast genome sequence of Lycium ruthenicum (Solanaceae), a traditional medicinal plant in China
title_sort complete chloroplast genome sequence of lycium ruthenicum (solanaceae), a traditional medicinal plant in china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687596/
https://www.ncbi.nlm.nih.gov/pubmed/33365598
http://dx.doi.org/10.1080/23802359.2019.1638324
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