Complete mitochondrial genome sequence and phylogenetic analysis of Lycodes polaris (Sabine, 1824)

Lycodes polaris is one of the most widely distributed and abundant eelpout species on the Arctic continental shelves with full mitogenome information unavailable. In this paper, complete mitochondrial genome of L. Polaris was determined with 16,595 bp in length, containing 13 protein-coding genes, 2...

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Autores principales: Li, Hai, Li, Yuan, Feng, Ji, Song, Puqing, Zhang, Nan, Lin, Longshan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687599/
https://www.ncbi.nlm.nih.gov/pubmed/33365491
http://dx.doi.org/10.1080/23802359.2019.1624650
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author Li, Hai
Li, Yuan
Feng, Ji
Song, Puqing
Zhang, Nan
Lin, Longshan
author_facet Li, Hai
Li, Yuan
Feng, Ji
Song, Puqing
Zhang, Nan
Lin, Longshan
author_sort Li, Hai
collection PubMed
description Lycodes polaris is one of the most widely distributed and abundant eelpout species on the Arctic continental shelves with full mitogenome information unavailable. In this paper, complete mitochondrial genome of L. Polaris was determined with 16,595 bp in length, containing 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, and 2 non-coding regions (origin of light strand replication and control region). All the protein-coding genes choose ATG as start codon in addition to that COI using GTG. Most genes use TAA or TAG as the stop codon while three others ended with incomplete stop codons. Phylogenetic relationship of L. polaris was also reconstructed. Our result will provide important basis for further studies of L. polaris.
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spelling pubmed-76875992020-12-22 Complete mitochondrial genome sequence and phylogenetic analysis of Lycodes polaris (Sabine, 1824) Li, Hai Li, Yuan Feng, Ji Song, Puqing Zhang, Nan Lin, Longshan Mitochondrial DNA B Resour Mitogenome Announcement Lycodes polaris is one of the most widely distributed and abundant eelpout species on the Arctic continental shelves with full mitogenome information unavailable. In this paper, complete mitochondrial genome of L. Polaris was determined with 16,595 bp in length, containing 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, and 2 non-coding regions (origin of light strand replication and control region). All the protein-coding genes choose ATG as start codon in addition to that COI using GTG. Most genes use TAA or TAG as the stop codon while three others ended with incomplete stop codons. Phylogenetic relationship of L. polaris was also reconstructed. Our result will provide important basis for further studies of L. polaris. Taylor & Francis 2019-07-11 /pmc/articles/PMC7687599/ /pubmed/33365491 http://dx.doi.org/10.1080/23802359.2019.1624650 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Li, Hai
Li, Yuan
Feng, Ji
Song, Puqing
Zhang, Nan
Lin, Longshan
Complete mitochondrial genome sequence and phylogenetic analysis of Lycodes polaris (Sabine, 1824)
title Complete mitochondrial genome sequence and phylogenetic analysis of Lycodes polaris (Sabine, 1824)
title_full Complete mitochondrial genome sequence and phylogenetic analysis of Lycodes polaris (Sabine, 1824)
title_fullStr Complete mitochondrial genome sequence and phylogenetic analysis of Lycodes polaris (Sabine, 1824)
title_full_unstemmed Complete mitochondrial genome sequence and phylogenetic analysis of Lycodes polaris (Sabine, 1824)
title_short Complete mitochondrial genome sequence and phylogenetic analysis of Lycodes polaris (Sabine, 1824)
title_sort complete mitochondrial genome sequence and phylogenetic analysis of lycodes polaris (sabine, 1824)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687599/
https://www.ncbi.nlm.nih.gov/pubmed/33365491
http://dx.doi.org/10.1080/23802359.2019.1624650
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