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Complete chloroplast genome sequence of Betula alnoides (Betulaceae)
Betula alnoides (Betulaceae) is a species widely distributed in north tropical and warm subtropical zones in South-East Asia and southern China. In this study, we described the complete chloroplast genome of B. alnoides based on Illumina paired-end sequencing. The chloroplast genome of B. alnoides i...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687603/ https://www.ncbi.nlm.nih.gov/pubmed/33365566 http://dx.doi.org/10.1080/23802359.2019.1637790 |
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author | Yin, Mingyu Guo, Junjie Zeng, Jie |
author_facet | Yin, Mingyu Guo, Junjie Zeng, Jie |
author_sort | Yin, Mingyu |
collection | PubMed |
description | Betula alnoides (Betulaceae) is a species widely distributed in north tropical and warm subtropical zones in South-East Asia and southern China. In this study, we described the complete chloroplast genome of B. alnoides based on Illumina paired-end sequencing. The chloroplast genome of B. alnoides is 160,990 bp long, including two inverted repeats (IRs, 26,022 bp), separated by a large single-copy region (LSC, 89,719 bp) and a small single-copy region (SSC, 19,227 bp). The genome contains 113 genes, including 79 protein-codon genes (PCGs), four rRNA genes, and 30 tRNA genes. The overall GC content of the chloroplast genome was 35.9%. Phylogenetic analysis demonstrated that B. alnoides of Sect. Betulaster (Spach) Regel was quite different from species of Sect. Betula. |
format | Online Article Text |
id | pubmed-7687603 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-76876032020-12-22 Complete chloroplast genome sequence of Betula alnoides (Betulaceae) Yin, Mingyu Guo, Junjie Zeng, Jie Mitochondrial DNA B Resour Mitogenome Announcement Betula alnoides (Betulaceae) is a species widely distributed in north tropical and warm subtropical zones in South-East Asia and southern China. In this study, we described the complete chloroplast genome of B. alnoides based on Illumina paired-end sequencing. The chloroplast genome of B. alnoides is 160,990 bp long, including two inverted repeats (IRs, 26,022 bp), separated by a large single-copy region (LSC, 89,719 bp) and a small single-copy region (SSC, 19,227 bp). The genome contains 113 genes, including 79 protein-codon genes (PCGs), four rRNA genes, and 30 tRNA genes. The overall GC content of the chloroplast genome was 35.9%. Phylogenetic analysis demonstrated that B. alnoides of Sect. Betulaster (Spach) Regel was quite different from species of Sect. Betula. Taylor & Francis 2019-07-12 /pmc/articles/PMC7687603/ /pubmed/33365566 http://dx.doi.org/10.1080/23802359.2019.1637790 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Yin, Mingyu Guo, Junjie Zeng, Jie Complete chloroplast genome sequence of Betula alnoides (Betulaceae) |
title | Complete chloroplast genome sequence of Betula alnoides (Betulaceae) |
title_full | Complete chloroplast genome sequence of Betula alnoides (Betulaceae) |
title_fullStr | Complete chloroplast genome sequence of Betula alnoides (Betulaceae) |
title_full_unstemmed | Complete chloroplast genome sequence of Betula alnoides (Betulaceae) |
title_short | Complete chloroplast genome sequence of Betula alnoides (Betulaceae) |
title_sort | complete chloroplast genome sequence of betula alnoides (betulaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687603/ https://www.ncbi.nlm.nih.gov/pubmed/33365566 http://dx.doi.org/10.1080/23802359.2019.1637790 |
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