Next-generation sequencing yields the complete chloroplast genome of Pleione forrestii (Orchidaceae)

Pleione forrestii is an endangered terrestrial orchid with significant ornamental values. Here, we report the first complete chloroplast genome of P. forrestii. The circular genome was 158,759 bp in length and consisted of a pair of inverted repeats (IR 26,429 bp), which were separated by a large si...

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Autores principales: Wu, Sha-Sha, Wu, Xiao-Qian, Dong, Na, Ling, Rui, Jiang, Hong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687623/
https://www.ncbi.nlm.nih.gov/pubmed/33365724
http://dx.doi.org/10.1080/23802359.2019.1637288
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author Wu, Sha-Sha
Wu, Xiao-Qian
Dong, Na
Ling, Rui
Jiang, Hong
author_facet Wu, Sha-Sha
Wu, Xiao-Qian
Dong, Na
Ling, Rui
Jiang, Hong
author_sort Wu, Sha-Sha
collection PubMed
description Pleione forrestii is an endangered terrestrial orchid with significant ornamental values. Here, we report the first complete chloroplast genome of P. forrestii. The circular genome was 158,759 bp in length and consisted of a pair of inverted repeats (IR 26,429 bp), which were separated by a large single-copy region (LSC 87,236 bp) and a small single copy-region (SSC 18,665 bp). It contained 135 genes (115 unique), including 87 protein-coding genes, 38 tRNAs, and 8 rRNAs. The maximum likelihood phylogenetic analysis indicated that P. forrestii was sister to P. bulbocodioides and P. formosana.
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spelling pubmed-76876232020-12-22 Next-generation sequencing yields the complete chloroplast genome of Pleione forrestii (Orchidaceae) Wu, Sha-Sha Wu, Xiao-Qian Dong, Na Ling, Rui Jiang, Hong Mitochondrial DNA B Resour Mitogenome Announcement Pleione forrestii is an endangered terrestrial orchid with significant ornamental values. Here, we report the first complete chloroplast genome of P. forrestii. The circular genome was 158,759 bp in length and consisted of a pair of inverted repeats (IR 26,429 bp), which were separated by a large single-copy region (LSC 87,236 bp) and a small single copy-region (SSC 18,665 bp). It contained 135 genes (115 unique), including 87 protein-coding genes, 38 tRNAs, and 8 rRNAs. The maximum likelihood phylogenetic analysis indicated that P. forrestii was sister to P. bulbocodioides and P. formosana. Taylor & Francis 2019-07-31 /pmc/articles/PMC7687623/ /pubmed/33365724 http://dx.doi.org/10.1080/23802359.2019.1637288 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Wu, Sha-Sha
Wu, Xiao-Qian
Dong, Na
Ling, Rui
Jiang, Hong
Next-generation sequencing yields the complete chloroplast genome of Pleione forrestii (Orchidaceae)
title Next-generation sequencing yields the complete chloroplast genome of Pleione forrestii (Orchidaceae)
title_full Next-generation sequencing yields the complete chloroplast genome of Pleione forrestii (Orchidaceae)
title_fullStr Next-generation sequencing yields the complete chloroplast genome of Pleione forrestii (Orchidaceae)
title_full_unstemmed Next-generation sequencing yields the complete chloroplast genome of Pleione forrestii (Orchidaceae)
title_short Next-generation sequencing yields the complete chloroplast genome of Pleione forrestii (Orchidaceae)
title_sort next-generation sequencing yields the complete chloroplast genome of pleione forrestii (orchidaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687623/
https://www.ncbi.nlm.nih.gov/pubmed/33365724
http://dx.doi.org/10.1080/23802359.2019.1637288
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