Characterization of the complete chloroplast genome of Suaeda salsa (Amaranthaceae/Chenopodiaceae), an annual succulent halophyte

Suaeda salsa, an annual succulent halophytic herb, is one of the major halophyte widely distributed in both saline inland and the intertidal zone. In this study, we report the complete chloroplast genome (plastome) of S. salsa. The plastome was 151,642 bp in length and comprises a large single-copy...

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Autores principales: Qu, Xiao-Jian, Li, Xiao-Tong, Zhang, Luo-Yan, Zhang, Xue-Jie, Fan, Shou-Jin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687626/
https://www.ncbi.nlm.nih.gov/pubmed/33365441
http://dx.doi.org/10.1080/23802359.2019.1623113
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author Qu, Xiao-Jian
Li, Xiao-Tong
Zhang, Luo-Yan
Zhang, Xue-Jie
Fan, Shou-Jin
author_facet Qu, Xiao-Jian
Li, Xiao-Tong
Zhang, Luo-Yan
Zhang, Xue-Jie
Fan, Shou-Jin
author_sort Qu, Xiao-Jian
collection PubMed
description Suaeda salsa, an annual succulent halophytic herb, is one of the major halophyte widely distributed in both saline inland and the intertidal zone. In this study, we report the complete chloroplast genome (plastome) of S. salsa. The plastome was 151,642 bp in length and comprises a large single-copy region (83,502 bp), a small single-copy region (17,780 bp), and a pair of inverted repeats (25,180 bp). It encodes 113 unique genes, including 79 protein-coding genes (PCGs), 30 tRNAs, and four rRNAs. The overall GC content of this plastome was 36.4%. Phylogenomic analysis based on 20 plastomes revealed that S. salsa was closely related to S. malacosperma.
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spelling pubmed-76876262020-12-22 Characterization of the complete chloroplast genome of Suaeda salsa (Amaranthaceae/Chenopodiaceae), an annual succulent halophyte Qu, Xiao-Jian Li, Xiao-Tong Zhang, Luo-Yan Zhang, Xue-Jie Fan, Shou-Jin Mitochondrial DNA B Resour Mitogenome Announcement Suaeda salsa, an annual succulent halophytic herb, is one of the major halophyte widely distributed in both saline inland and the intertidal zone. In this study, we report the complete chloroplast genome (plastome) of S. salsa. The plastome was 151,642 bp in length and comprises a large single-copy region (83,502 bp), a small single-copy region (17,780 bp), and a pair of inverted repeats (25,180 bp). It encodes 113 unique genes, including 79 protein-coding genes (PCGs), 30 tRNAs, and four rRNAs. The overall GC content of this plastome was 36.4%. Phylogenomic analysis based on 20 plastomes revealed that S. salsa was closely related to S. malacosperma. Taylor & Francis 2019-07-10 /pmc/articles/PMC7687626/ /pubmed/33365441 http://dx.doi.org/10.1080/23802359.2019.1623113 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Qu, Xiao-Jian
Li, Xiao-Tong
Zhang, Luo-Yan
Zhang, Xue-Jie
Fan, Shou-Jin
Characterization of the complete chloroplast genome of Suaeda salsa (Amaranthaceae/Chenopodiaceae), an annual succulent halophyte
title Characterization of the complete chloroplast genome of Suaeda salsa (Amaranthaceae/Chenopodiaceae), an annual succulent halophyte
title_full Characterization of the complete chloroplast genome of Suaeda salsa (Amaranthaceae/Chenopodiaceae), an annual succulent halophyte
title_fullStr Characterization of the complete chloroplast genome of Suaeda salsa (Amaranthaceae/Chenopodiaceae), an annual succulent halophyte
title_full_unstemmed Characterization of the complete chloroplast genome of Suaeda salsa (Amaranthaceae/Chenopodiaceae), an annual succulent halophyte
title_short Characterization of the complete chloroplast genome of Suaeda salsa (Amaranthaceae/Chenopodiaceae), an annual succulent halophyte
title_sort characterization of the complete chloroplast genome of suaeda salsa (amaranthaceae/chenopodiaceae), an annual succulent halophyte
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687626/
https://www.ncbi.nlm.nih.gov/pubmed/33365441
http://dx.doi.org/10.1080/23802359.2019.1623113
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