The complete chloroplast genome sequence of Liparis vivipara (Orchidaceae)

Liparis vivipara is a terrestrial orchid distributes in southwestern China. In this study, we reported the first complete chloroplast genome of L. vivipara. The whole genome was 158,329 bp, consisting of a pair of inverted repeats (IR 27,043 bp), a large single-copy region (LSC 85,950 bp), and a sma...

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Autores principales: Zhang, Diyang, Liu, Ding-Kun, Hao, Yang, Lan, Si-Ren, Liu, Zhong-Jian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687627/
https://www.ncbi.nlm.nih.gov/pubmed/33365484
http://dx.doi.org/10.1080/23802359.2019.1624638
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author Zhang, Diyang
Liu, Ding-Kun
Hao, Yang
Lan, Si-Ren
Liu, Zhong-Jian
author_facet Zhang, Diyang
Liu, Ding-Kun
Hao, Yang
Lan, Si-Ren
Liu, Zhong-Jian
author_sort Zhang, Diyang
collection PubMed
description Liparis vivipara is a terrestrial orchid distributes in southwestern China. In this study, we reported the first complete chloroplast genome of L. vivipara. The whole genome was 158,329 bp, consisting of a pair of inverted repeats (IR 27,043 bp), a large single-copy region (LSC 85,950 bp), and a small single-copy region (SSC 18,293 bp). The complete genome contained 132 genes, including 77 protein-coding genes, 38 tRNA, and 8 rRNA genes. The overall GC content of the whole genome was 36.9%. A maximum-likelihood phylogenetic analysis demonstrated a close relationship between L. vivipara and L. loeselii.
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spelling pubmed-76876272020-12-22 The complete chloroplast genome sequence of Liparis vivipara (Orchidaceae) Zhang, Diyang Liu, Ding-Kun Hao, Yang Lan, Si-Ren Liu, Zhong-Jian Mitochondrial DNA B Resour Mitogenome Announcement Liparis vivipara is a terrestrial orchid distributes in southwestern China. In this study, we reported the first complete chloroplast genome of L. vivipara. The whole genome was 158,329 bp, consisting of a pair of inverted repeats (IR 27,043 bp), a large single-copy region (LSC 85,950 bp), and a small single-copy region (SSC 18,293 bp). The complete genome contained 132 genes, including 77 protein-coding genes, 38 tRNA, and 8 rRNA genes. The overall GC content of the whole genome was 36.9%. A maximum-likelihood phylogenetic analysis demonstrated a close relationship between L. vivipara and L. loeselii. Taylor & Francis 2019-07-11 /pmc/articles/PMC7687627/ /pubmed/33365484 http://dx.doi.org/10.1080/23802359.2019.1624638 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Zhang, Diyang
Liu, Ding-Kun
Hao, Yang
Lan, Si-Ren
Liu, Zhong-Jian
The complete chloroplast genome sequence of Liparis vivipara (Orchidaceae)
title The complete chloroplast genome sequence of Liparis vivipara (Orchidaceae)
title_full The complete chloroplast genome sequence of Liparis vivipara (Orchidaceae)
title_fullStr The complete chloroplast genome sequence of Liparis vivipara (Orchidaceae)
title_full_unstemmed The complete chloroplast genome sequence of Liparis vivipara (Orchidaceae)
title_short The complete chloroplast genome sequence of Liparis vivipara (Orchidaceae)
title_sort complete chloroplast genome sequence of liparis vivipara (orchidaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687627/
https://www.ncbi.nlm.nih.gov/pubmed/33365484
http://dx.doi.org/10.1080/23802359.2019.1624638
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