Characterization of the complete chloroplast genome of Actinidia Melanandra (Actinidiaceae)

The whole chloroplast (cp) genome sequence of Actinidia melanandra has been characterized from Illumina pair-end sequencing. The complete cp genome was 156,124 bp in length, containing a large single-copy region (LSC) of 88,006 bp and a small single-copy region (SSC) of 20,332 bp, which were separat...

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Detalles Bibliográficos
Autores principales: Zhao, Yuemei, Zhao, Zhixin, Tang, Weili, Li, Xiaoling, Zhao, Yongping, Gao, Baoyun, Xie, Xiaodan, Zhang, Xiaobin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687634/
https://www.ncbi.nlm.nih.gov/pubmed/33365471
http://dx.doi.org/10.1080/23802359.2019.1623129
Descripción
Sumario:The whole chloroplast (cp) genome sequence of Actinidia melanandra has been characterized from Illumina pair-end sequencing. The complete cp genome was 156,124 bp in length, containing a large single-copy region (LSC) of 88,006 bp and a small single-copy region (SSC) of 20,332 bp, which were separated by a pair of inverted repeat (IR) regions of 23,893 bp. The genome contained 131 genes, including 84 protein-coding genes, 39 tRNA genes, and 8 ribosomal RNA genes (4 rRNA species). Most genes occur as a single copy, while 17 gene species are duplicated. Phylogenetic analysis revealed that A. melanandra is closely related to the species of A. deliciosa and A. chinensis.

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