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RETRACTED ARTICLE: Integrative analysis of the circRNA–miRNA regulatory network in atrial fibrillation

We aimed to investigate the circRNA–miRNA regulatory network in atrial fibrillation (AF) by using Cytoscape and HMDD v3.0. Finally, 120 differentially expressed circRNAs in peripheral blood monocytes of 4 AF patients were preliminarily screened by circRNA microarray. circRNA_4648, circRNA_4631, and...

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Autores principales: Ruan, Zhong-bao, Wang, Fei, Yu, Qiu-ping, Chen, Ge-cai, Zhu, Li
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687891/
https://www.ncbi.nlm.nih.gov/pubmed/33235238
http://dx.doi.org/10.1038/s41598-020-77485-1
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author Ruan, Zhong-bao
Wang, Fei
Yu, Qiu-ping
Chen, Ge-cai
Zhu, Li
author_facet Ruan, Zhong-bao
Wang, Fei
Yu, Qiu-ping
Chen, Ge-cai
Zhu, Li
author_sort Ruan, Zhong-bao
collection PubMed
description We aimed to investigate the circRNA–miRNA regulatory network in atrial fibrillation (AF) by using Cytoscape and HMDD v3.0. Finally, 120 differentially expressed circRNAs in peripheral blood monocytes of 4 AF patients were preliminarily screened by circRNA microarray. circRNA_4648, circRNA_4631, and circRNA_2875 were the first four circRNAs with the most binding nodes in the circRNA–miRNA network. The top three most frequent miRNAs for up-regulated circRNAs were hsa-miR-328 that interacted with 5 up-regulated circRNAs, hsa-miR-4685-5p with 4 up-regulated circRNAs, hsa-miR-3150a-3p, hsa-miR-4649-5p, hsa-miR-4783-3p, and hsa-miR-8073 with 3 up-regulated circRNAs,, while the top three most frequent miRNAs for down-regulated circRNAs were hsa-miR-328 that interacted with 14 down-regulated circRNAs, hsa-miR-4685-5p with 11 down-regulated circRNAs and hsa-miR-661 with 9 down-regulated circRNAs. According to HMDD v3.0, five up-regulated and eleven down-regulated circRNAs were found to interact with AF related miRNAs. These results indicated the possible regulatory network between circRNAs and miRNAs in the pathogenesis of AF.
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spelling pubmed-76878912020-11-27 RETRACTED ARTICLE: Integrative analysis of the circRNA–miRNA regulatory network in atrial fibrillation Ruan, Zhong-bao Wang, Fei Yu, Qiu-ping Chen, Ge-cai Zhu, Li Sci Rep Article We aimed to investigate the circRNA–miRNA regulatory network in atrial fibrillation (AF) by using Cytoscape and HMDD v3.0. Finally, 120 differentially expressed circRNAs in peripheral blood monocytes of 4 AF patients were preliminarily screened by circRNA microarray. circRNA_4648, circRNA_4631, and circRNA_2875 were the first four circRNAs with the most binding nodes in the circRNA–miRNA network. The top three most frequent miRNAs for up-regulated circRNAs were hsa-miR-328 that interacted with 5 up-regulated circRNAs, hsa-miR-4685-5p with 4 up-regulated circRNAs, hsa-miR-3150a-3p, hsa-miR-4649-5p, hsa-miR-4783-3p, and hsa-miR-8073 with 3 up-regulated circRNAs,, while the top three most frequent miRNAs for down-regulated circRNAs were hsa-miR-328 that interacted with 14 down-regulated circRNAs, hsa-miR-4685-5p with 11 down-regulated circRNAs and hsa-miR-661 with 9 down-regulated circRNAs. According to HMDD v3.0, five up-regulated and eleven down-regulated circRNAs were found to interact with AF related miRNAs. These results indicated the possible regulatory network between circRNAs and miRNAs in the pathogenesis of AF. Nature Publishing Group UK 2020-11-24 /pmc/articles/PMC7687891/ /pubmed/33235238 http://dx.doi.org/10.1038/s41598-020-77485-1 Text en © The Author(s) 2020 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Ruan, Zhong-bao
Wang, Fei
Yu, Qiu-ping
Chen, Ge-cai
Zhu, Li
RETRACTED ARTICLE: Integrative analysis of the circRNA–miRNA regulatory network in atrial fibrillation
title RETRACTED ARTICLE: Integrative analysis of the circRNA–miRNA regulatory network in atrial fibrillation
title_full RETRACTED ARTICLE: Integrative analysis of the circRNA–miRNA regulatory network in atrial fibrillation
title_fullStr RETRACTED ARTICLE: Integrative analysis of the circRNA–miRNA regulatory network in atrial fibrillation
title_full_unstemmed RETRACTED ARTICLE: Integrative analysis of the circRNA–miRNA regulatory network in atrial fibrillation
title_short RETRACTED ARTICLE: Integrative analysis of the circRNA–miRNA regulatory network in atrial fibrillation
title_sort retracted article: integrative analysis of the circrna–mirna regulatory network in atrial fibrillation
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687891/
https://www.ncbi.nlm.nih.gov/pubmed/33235238
http://dx.doi.org/10.1038/s41598-020-77485-1
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