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RETRACTED ARTICLE: Integrative analysis of the circRNA–miRNA regulatory network in atrial fibrillation
We aimed to investigate the circRNA–miRNA regulatory network in atrial fibrillation (AF) by using Cytoscape and HMDD v3.0. Finally, 120 differentially expressed circRNAs in peripheral blood monocytes of 4 AF patients were preliminarily screened by circRNA microarray. circRNA_4648, circRNA_4631, and...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687891/ https://www.ncbi.nlm.nih.gov/pubmed/33235238 http://dx.doi.org/10.1038/s41598-020-77485-1 |
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author | Ruan, Zhong-bao Wang, Fei Yu, Qiu-ping Chen, Ge-cai Zhu, Li |
author_facet | Ruan, Zhong-bao Wang, Fei Yu, Qiu-ping Chen, Ge-cai Zhu, Li |
author_sort | Ruan, Zhong-bao |
collection | PubMed |
description | We aimed to investigate the circRNA–miRNA regulatory network in atrial fibrillation (AF) by using Cytoscape and HMDD v3.0. Finally, 120 differentially expressed circRNAs in peripheral blood monocytes of 4 AF patients were preliminarily screened by circRNA microarray. circRNA_4648, circRNA_4631, and circRNA_2875 were the first four circRNAs with the most binding nodes in the circRNA–miRNA network. The top three most frequent miRNAs for up-regulated circRNAs were hsa-miR-328 that interacted with 5 up-regulated circRNAs, hsa-miR-4685-5p with 4 up-regulated circRNAs, hsa-miR-3150a-3p, hsa-miR-4649-5p, hsa-miR-4783-3p, and hsa-miR-8073 with 3 up-regulated circRNAs,, while the top three most frequent miRNAs for down-regulated circRNAs were hsa-miR-328 that interacted with 14 down-regulated circRNAs, hsa-miR-4685-5p with 11 down-regulated circRNAs and hsa-miR-661 with 9 down-regulated circRNAs. According to HMDD v3.0, five up-regulated and eleven down-regulated circRNAs were found to interact with AF related miRNAs. These results indicated the possible regulatory network between circRNAs and miRNAs in the pathogenesis of AF. |
format | Online Article Text |
id | pubmed-7687891 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-76878912020-11-27 RETRACTED ARTICLE: Integrative analysis of the circRNA–miRNA regulatory network in atrial fibrillation Ruan, Zhong-bao Wang, Fei Yu, Qiu-ping Chen, Ge-cai Zhu, Li Sci Rep Article We aimed to investigate the circRNA–miRNA regulatory network in atrial fibrillation (AF) by using Cytoscape and HMDD v3.0. Finally, 120 differentially expressed circRNAs in peripheral blood monocytes of 4 AF patients were preliminarily screened by circRNA microarray. circRNA_4648, circRNA_4631, and circRNA_2875 were the first four circRNAs with the most binding nodes in the circRNA–miRNA network. The top three most frequent miRNAs for up-regulated circRNAs were hsa-miR-328 that interacted with 5 up-regulated circRNAs, hsa-miR-4685-5p with 4 up-regulated circRNAs, hsa-miR-3150a-3p, hsa-miR-4649-5p, hsa-miR-4783-3p, and hsa-miR-8073 with 3 up-regulated circRNAs,, while the top three most frequent miRNAs for down-regulated circRNAs were hsa-miR-328 that interacted with 14 down-regulated circRNAs, hsa-miR-4685-5p with 11 down-regulated circRNAs and hsa-miR-661 with 9 down-regulated circRNAs. According to HMDD v3.0, five up-regulated and eleven down-regulated circRNAs were found to interact with AF related miRNAs. These results indicated the possible regulatory network between circRNAs and miRNAs in the pathogenesis of AF. Nature Publishing Group UK 2020-11-24 /pmc/articles/PMC7687891/ /pubmed/33235238 http://dx.doi.org/10.1038/s41598-020-77485-1 Text en © The Author(s) 2020 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Ruan, Zhong-bao Wang, Fei Yu, Qiu-ping Chen, Ge-cai Zhu, Li RETRACTED ARTICLE: Integrative analysis of the circRNA–miRNA regulatory network in atrial fibrillation |
title | RETRACTED ARTICLE: Integrative analysis of the circRNA–miRNA regulatory network in atrial fibrillation |
title_full | RETRACTED ARTICLE: Integrative analysis of the circRNA–miRNA regulatory network in atrial fibrillation |
title_fullStr | RETRACTED ARTICLE: Integrative analysis of the circRNA–miRNA regulatory network in atrial fibrillation |
title_full_unstemmed | RETRACTED ARTICLE: Integrative analysis of the circRNA–miRNA regulatory network in atrial fibrillation |
title_short | RETRACTED ARTICLE: Integrative analysis of the circRNA–miRNA regulatory network in atrial fibrillation |
title_sort | retracted article: integrative analysis of the circrna–mirna regulatory network in atrial fibrillation |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7687891/ https://www.ncbi.nlm.nih.gov/pubmed/33235238 http://dx.doi.org/10.1038/s41598-020-77485-1 |
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