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Renin angiotensin system genes are biomarkers for personalized treatment of acute myeloid leukemia with Doxorubicin as well as etoposide
Despite the availability of various treatment protocols, response to therapy in patients with Acute Myeloid Leukemia (AML) remains largely unpredictable. Transcriptomic profiling studies have thus far revealed the presence of molecular subtypes of AML that are not accounted for by standard clinical...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7688131/ https://www.ncbi.nlm.nih.gov/pubmed/33237942 http://dx.doi.org/10.1371/journal.pone.0242497 |
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author | Turk, Seyhan Turk, Can Akbar, Muhammad Waqas Kucukkaraduman, Baris Isbilen, Murat Demirkol Canli, Secil Malkan, Umit Yavuz Okay, Mufide Ucar, Gulberk Sayinalp, Nilgun Haznedaroglu, Ibrahim Celalettin Gure, Ali Osmay |
author_facet | Turk, Seyhan Turk, Can Akbar, Muhammad Waqas Kucukkaraduman, Baris Isbilen, Murat Demirkol Canli, Secil Malkan, Umit Yavuz Okay, Mufide Ucar, Gulberk Sayinalp, Nilgun Haznedaroglu, Ibrahim Celalettin Gure, Ali Osmay |
author_sort | Turk, Seyhan |
collection | PubMed |
description | Despite the availability of various treatment protocols, response to therapy in patients with Acute Myeloid Leukemia (AML) remains largely unpredictable. Transcriptomic profiling studies have thus far revealed the presence of molecular subtypes of AML that are not accounted for by standard clinical parameters or by routinely used biomarkers. Such molecular subtypes of AML are predicted to vary in response to chemotherapy or targeted therapy. The Renin-Angiotensin System (RAS) is an important group of proteins that play a critical role in regulating blood pressure, vascular resistance and fluid/electrolyte balance. RAS pathway genes are also known to be present locally in tissues such as the bone marrow, where they play an important role in leukemic hematopoiesis. In this study, we asked if the RAS genes could be utilized to predict drug responses in patients with AML. We show that the combined in silico analysis of up to five RAS genes can reliably predict sensitivity to Doxorubicin as well as Etoposide in AML. The same genes could also predict sensitivity to Doxorubicin when tested in vitro. Additionally, gene set enrichment analysis revealed enrichment of TNF-alpha and type-I IFN response genes among sensitive, and TGF-beta and fibronectin related genes in resistant cancer cells. However, this does not seem to reflect an epithelial to mesenchymal transition per se. We also identified that RAS genes can stratify patients with AML into subtypes with distinct prognosis. Together, our results demonstrate that genes present in RAS are biomarkers for drug sensitivity and the prognostication of AML. |
format | Online Article Text |
id | pubmed-7688131 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-76881312020-12-05 Renin angiotensin system genes are biomarkers for personalized treatment of acute myeloid leukemia with Doxorubicin as well as etoposide Turk, Seyhan Turk, Can Akbar, Muhammad Waqas Kucukkaraduman, Baris Isbilen, Murat Demirkol Canli, Secil Malkan, Umit Yavuz Okay, Mufide Ucar, Gulberk Sayinalp, Nilgun Haznedaroglu, Ibrahim Celalettin Gure, Ali Osmay PLoS One Research Article Despite the availability of various treatment protocols, response to therapy in patients with Acute Myeloid Leukemia (AML) remains largely unpredictable. Transcriptomic profiling studies have thus far revealed the presence of molecular subtypes of AML that are not accounted for by standard clinical parameters or by routinely used biomarkers. Such molecular subtypes of AML are predicted to vary in response to chemotherapy or targeted therapy. The Renin-Angiotensin System (RAS) is an important group of proteins that play a critical role in regulating blood pressure, vascular resistance and fluid/electrolyte balance. RAS pathway genes are also known to be present locally in tissues such as the bone marrow, where they play an important role in leukemic hematopoiesis. In this study, we asked if the RAS genes could be utilized to predict drug responses in patients with AML. We show that the combined in silico analysis of up to five RAS genes can reliably predict sensitivity to Doxorubicin as well as Etoposide in AML. The same genes could also predict sensitivity to Doxorubicin when tested in vitro. Additionally, gene set enrichment analysis revealed enrichment of TNF-alpha and type-I IFN response genes among sensitive, and TGF-beta and fibronectin related genes in resistant cancer cells. However, this does not seem to reflect an epithelial to mesenchymal transition per se. We also identified that RAS genes can stratify patients with AML into subtypes with distinct prognosis. Together, our results demonstrate that genes present in RAS are biomarkers for drug sensitivity and the prognostication of AML. Public Library of Science 2020-11-25 /pmc/articles/PMC7688131/ /pubmed/33237942 http://dx.doi.org/10.1371/journal.pone.0242497 Text en © 2020 Turk et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Turk, Seyhan Turk, Can Akbar, Muhammad Waqas Kucukkaraduman, Baris Isbilen, Murat Demirkol Canli, Secil Malkan, Umit Yavuz Okay, Mufide Ucar, Gulberk Sayinalp, Nilgun Haznedaroglu, Ibrahim Celalettin Gure, Ali Osmay Renin angiotensin system genes are biomarkers for personalized treatment of acute myeloid leukemia with Doxorubicin as well as etoposide |
title | Renin angiotensin system genes are biomarkers for personalized treatment of acute myeloid leukemia with Doxorubicin as well as etoposide |
title_full | Renin angiotensin system genes are biomarkers for personalized treatment of acute myeloid leukemia with Doxorubicin as well as etoposide |
title_fullStr | Renin angiotensin system genes are biomarkers for personalized treatment of acute myeloid leukemia with Doxorubicin as well as etoposide |
title_full_unstemmed | Renin angiotensin system genes are biomarkers for personalized treatment of acute myeloid leukemia with Doxorubicin as well as etoposide |
title_short | Renin angiotensin system genes are biomarkers for personalized treatment of acute myeloid leukemia with Doxorubicin as well as etoposide |
title_sort | renin angiotensin system genes are biomarkers for personalized treatment of acute myeloid leukemia with doxorubicin as well as etoposide |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7688131/ https://www.ncbi.nlm.nih.gov/pubmed/33237942 http://dx.doi.org/10.1371/journal.pone.0242497 |
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