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Single cell profiling of capillary blood enables out of clinic human immunity studies

An individual’s immune system is driven by both genetic and environmental factors that vary over time. To better understand the temporal and inter-individual variability of gene expression within distinct immune cell types, we developed a platform that leverages multiplexed single-cell sequencing an...

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Autores principales: Dobreva, Tatyana, Brown, David, Park, Jong Hwee, Thomson, Matt
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7688970/
https://www.ncbi.nlm.nih.gov/pubmed/33239690
http://dx.doi.org/10.1038/s41598-020-77073-3
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author Dobreva, Tatyana
Brown, David
Park, Jong Hwee
Thomson, Matt
author_facet Dobreva, Tatyana
Brown, David
Park, Jong Hwee
Thomson, Matt
author_sort Dobreva, Tatyana
collection PubMed
description An individual’s immune system is driven by both genetic and environmental factors that vary over time. To better understand the temporal and inter-individual variability of gene expression within distinct immune cell types, we developed a platform that leverages multiplexed single-cell sequencing and out-of-clinic capillary blood extraction to enable simplified, cost-effective profiling of the human immune system across people and time at single-cell resolution. Using the platform, we detect widespread differences in cell type-specific gene expression between subjects that are stable over multiple days.
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spelling pubmed-76889702020-11-27 Single cell profiling of capillary blood enables out of clinic human immunity studies Dobreva, Tatyana Brown, David Park, Jong Hwee Thomson, Matt Sci Rep Article An individual’s immune system is driven by both genetic and environmental factors that vary over time. To better understand the temporal and inter-individual variability of gene expression within distinct immune cell types, we developed a platform that leverages multiplexed single-cell sequencing and out-of-clinic capillary blood extraction to enable simplified, cost-effective profiling of the human immune system across people and time at single-cell resolution. Using the platform, we detect widespread differences in cell type-specific gene expression between subjects that are stable over multiple days. Nature Publishing Group UK 2020-11-25 /pmc/articles/PMC7688970/ /pubmed/33239690 http://dx.doi.org/10.1038/s41598-020-77073-3 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Dobreva, Tatyana
Brown, David
Park, Jong Hwee
Thomson, Matt
Single cell profiling of capillary blood enables out of clinic human immunity studies
title Single cell profiling of capillary blood enables out of clinic human immunity studies
title_full Single cell profiling of capillary blood enables out of clinic human immunity studies
title_fullStr Single cell profiling of capillary blood enables out of clinic human immunity studies
title_full_unstemmed Single cell profiling of capillary blood enables out of clinic human immunity studies
title_short Single cell profiling of capillary blood enables out of clinic human immunity studies
title_sort single cell profiling of capillary blood enables out of clinic human immunity studies
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7688970/
https://www.ncbi.nlm.nih.gov/pubmed/33239690
http://dx.doi.org/10.1038/s41598-020-77073-3
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