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Relative contributions of family history and a polygenic risk score on COPD and related outcomes: COPDGene and ECLIPSE studies

INTRODUCTION: Family history is a risk factor for chronic obstructive pulmonary disease (COPD). We previously developed a COPD risk score from genome-wide genetic markers (Polygenic Risk Score, PRS). Whether the PRS and family history provide complementary or redundant information for predicting COP...

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Autores principales: Moll, Matthew, Lutz, Sharon M., Ghosh, Auyon J., Sakornsakolpat, Phuwanat, Hersh, Craig P., Beaty, Terri H., Dudbridge, Frank, Tobin, Martin D., Mittleman, Murray A., Silverman, Edwin K., Hobbs, Brian D., Cho, Michael H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BMJ Publishing Group 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7689586/
https://www.ncbi.nlm.nih.gov/pubmed/33239407
http://dx.doi.org/10.1136/bmjresp-2020-000755
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author Moll, Matthew
Lutz, Sharon M.
Ghosh, Auyon J.
Sakornsakolpat, Phuwanat
Hersh, Craig P.
Beaty, Terri H.
Dudbridge, Frank
Tobin, Martin D.
Mittleman, Murray A.
Silverman, Edwin K.
Hobbs, Brian D.
Cho, Michael H.
author_facet Moll, Matthew
Lutz, Sharon M.
Ghosh, Auyon J.
Sakornsakolpat, Phuwanat
Hersh, Craig P.
Beaty, Terri H.
Dudbridge, Frank
Tobin, Martin D.
Mittleman, Murray A.
Silverman, Edwin K.
Hobbs, Brian D.
Cho, Michael H.
author_sort Moll, Matthew
collection PubMed
description INTRODUCTION: Family history is a risk factor for chronic obstructive pulmonary disease (COPD). We previously developed a COPD risk score from genome-wide genetic markers (Polygenic Risk Score, PRS). Whether the PRS and family history provide complementary or redundant information for predicting COPD and related outcomes is unknown. METHODS: We assessed the predictive capacity of family history and PRS on COPD and COPD-related outcomes in non-Hispanic white (NHW) and African American (AA) subjects from COPDGene and ECLIPSE studies. We also performed interaction and mediation analyses. RESULTS: In COPDGene, family history and PRS were significantly associated with COPD in a single model (P(FamHx) <0.0001; P(PRS)<0.0001). Similar trends were seen in ECLIPSE. The area under the receiver operator characteristic curve for a model containing family history and PRS was significantly higher than a model with PRS (p=0.00035) in NHWs and a model with family history (p<0.0001) alone in NHWs and AAs. Both family history and PRS were significantly associated with measures of quantitative emphysema and airway thickness. There was a weakly positive interaction between family history and the PRS under the additive, but not multiplicative scale in NHWs (relative excess risk due to interaction=0.48, p=0.04). Mediation analyses found that a significant proportion of the effect of family history on COPD was mediated through PRS in NHWs (16.5%, 95% CI 9.4% to 24.3%), but not AAs. CONCLUSION: Family history and the PRS provide complementary information for predicting COPD and related outcomes. Future studies can address the impact of obtaining both measures in clinical practice.
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spelling pubmed-76895862020-12-07 Relative contributions of family history and a polygenic risk score on COPD and related outcomes: COPDGene and ECLIPSE studies Moll, Matthew Lutz, Sharon M. Ghosh, Auyon J. Sakornsakolpat, Phuwanat Hersh, Craig P. Beaty, Terri H. Dudbridge, Frank Tobin, Martin D. Mittleman, Murray A. Silverman, Edwin K. Hobbs, Brian D. Cho, Michael H. BMJ Open Respir Res Chronic Obstructive Pulmonary Disease INTRODUCTION: Family history is a risk factor for chronic obstructive pulmonary disease (COPD). We previously developed a COPD risk score from genome-wide genetic markers (Polygenic Risk Score, PRS). Whether the PRS and family history provide complementary or redundant information for predicting COPD and related outcomes is unknown. METHODS: We assessed the predictive capacity of family history and PRS on COPD and COPD-related outcomes in non-Hispanic white (NHW) and African American (AA) subjects from COPDGene and ECLIPSE studies. We also performed interaction and mediation analyses. RESULTS: In COPDGene, family history and PRS were significantly associated with COPD in a single model (P(FamHx) <0.0001; P(PRS)<0.0001). Similar trends were seen in ECLIPSE. The area under the receiver operator characteristic curve for a model containing family history and PRS was significantly higher than a model with PRS (p=0.00035) in NHWs and a model with family history (p<0.0001) alone in NHWs and AAs. Both family history and PRS were significantly associated with measures of quantitative emphysema and airway thickness. There was a weakly positive interaction between family history and the PRS under the additive, but not multiplicative scale in NHWs (relative excess risk due to interaction=0.48, p=0.04). Mediation analyses found that a significant proportion of the effect of family history on COPD was mediated through PRS in NHWs (16.5%, 95% CI 9.4% to 24.3%), but not AAs. CONCLUSION: Family history and the PRS provide complementary information for predicting COPD and related outcomes. Future studies can address the impact of obtaining both measures in clinical practice. BMJ Publishing Group 2020-11-25 /pmc/articles/PMC7689586/ /pubmed/33239407 http://dx.doi.org/10.1136/bmjresp-2020-000755 Text en © Author(s) (or their employer(s)) 2020. Re-use permitted under CC BY. Published by BMJ. https://creativecommons.org/licenses/by/4.0/ https://creativecommons.org/licenses/by/4.0/This is an open access article distributed in accordance with the Creative Commons Attribution 4.0 Unported (CC BY 4.0) license, which permits others to copy, redistribute, remix, transform and build upon this work for any purpose, provided the original work is properly cited, a link to the licence is given, and indication of whether changes were made. See: https://creativecommons.org/licenses/by/4.0/.
spellingShingle Chronic Obstructive Pulmonary Disease
Moll, Matthew
Lutz, Sharon M.
Ghosh, Auyon J.
Sakornsakolpat, Phuwanat
Hersh, Craig P.
Beaty, Terri H.
Dudbridge, Frank
Tobin, Martin D.
Mittleman, Murray A.
Silverman, Edwin K.
Hobbs, Brian D.
Cho, Michael H.
Relative contributions of family history and a polygenic risk score on COPD and related outcomes: COPDGene and ECLIPSE studies
title Relative contributions of family history and a polygenic risk score on COPD and related outcomes: COPDGene and ECLIPSE studies
title_full Relative contributions of family history and a polygenic risk score on COPD and related outcomes: COPDGene and ECLIPSE studies
title_fullStr Relative contributions of family history and a polygenic risk score on COPD and related outcomes: COPDGene and ECLIPSE studies
title_full_unstemmed Relative contributions of family history and a polygenic risk score on COPD and related outcomes: COPDGene and ECLIPSE studies
title_short Relative contributions of family history and a polygenic risk score on COPD and related outcomes: COPDGene and ECLIPSE studies
title_sort relative contributions of family history and a polygenic risk score on copd and related outcomes: copdgene and eclipse studies
topic Chronic Obstructive Pulmonary Disease
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7689586/
https://www.ncbi.nlm.nih.gov/pubmed/33239407
http://dx.doi.org/10.1136/bmjresp-2020-000755
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