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Identification of miR-29c-3p as a Robust Normalizer for Urine microRNA Studies in Bladder Cancer
Bladder cancer (BC) is among the most frequent malignancies worldwide, being the most expensive cancer to treat and monitor and the most lethal urological cancer. Urine microRNAs (miRNAs) have been proposed as novel non-invasive biomarkers to early diagnose and monitor BC patients in order to avoid...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7690381/ https://www.ncbi.nlm.nih.gov/pubmed/33105660 http://dx.doi.org/10.3390/biomedicines8110447 |
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author | Oto, Julia Plana, Emma Fernández-Pardo, Álvaro Cana, Fernando Martínez-Sarmiento, Manuel Vera-Donoso, César D. España, Francisco Medina, Pilar |
author_facet | Oto, Julia Plana, Emma Fernández-Pardo, Álvaro Cana, Fernando Martínez-Sarmiento, Manuel Vera-Donoso, César D. España, Francisco Medina, Pilar |
author_sort | Oto, Julia |
collection | PubMed |
description | Bladder cancer (BC) is among the most frequent malignancies worldwide, being the most expensive cancer to treat and monitor and the most lethal urological cancer. Urine microRNAs (miRNAs) have been proposed as novel non-invasive biomarkers to early diagnose and monitor BC patients in order to avoid the performance of current aggressive diagnostic techniques. However, huge discrepancies arise among studies mainly due to the lack of standardization in the normalization, a crucial step in all miRNA studies. Our aim was to identify the best miRNA normalizer for miRNA studies in urine of BC patients. We evaluated the performance of 110 candidate miRNAs in urine of 35 BC patients and 15 healthy controls by Real Time quantitative Polymerase Chain Reaction (RT-qPCR) followed by a stability analysis with RefFinder. In this screening stage, miR-29c-3p arose as the most stably expressed miRNA in BC and controls, with a good expression level. Stability of miR-29c-3p expression was validated in an independent cohort of 153 BC patients and 57 controls. Finally, we evaluated the robustness of miR-29c-3p as normalizer in the expression study of miR-200c-3p, a potential diagnostic marker for BC. We propose miR-29c-3p as a normalizer for miRNA studies in BC urine. This is the first study that characterizes a reliable normalizer that may allow the comparison of future urine miRNA studies as non-invasive biomarkers for BC diagnosis and monitoring. |
format | Online Article Text |
id | pubmed-7690381 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-76903812020-11-27 Identification of miR-29c-3p as a Robust Normalizer for Urine microRNA Studies in Bladder Cancer Oto, Julia Plana, Emma Fernández-Pardo, Álvaro Cana, Fernando Martínez-Sarmiento, Manuel Vera-Donoso, César D. España, Francisco Medina, Pilar Biomedicines Article Bladder cancer (BC) is among the most frequent malignancies worldwide, being the most expensive cancer to treat and monitor and the most lethal urological cancer. Urine microRNAs (miRNAs) have been proposed as novel non-invasive biomarkers to early diagnose and monitor BC patients in order to avoid the performance of current aggressive diagnostic techniques. However, huge discrepancies arise among studies mainly due to the lack of standardization in the normalization, a crucial step in all miRNA studies. Our aim was to identify the best miRNA normalizer for miRNA studies in urine of BC patients. We evaluated the performance of 110 candidate miRNAs in urine of 35 BC patients and 15 healthy controls by Real Time quantitative Polymerase Chain Reaction (RT-qPCR) followed by a stability analysis with RefFinder. In this screening stage, miR-29c-3p arose as the most stably expressed miRNA in BC and controls, with a good expression level. Stability of miR-29c-3p expression was validated in an independent cohort of 153 BC patients and 57 controls. Finally, we evaluated the robustness of miR-29c-3p as normalizer in the expression study of miR-200c-3p, a potential diagnostic marker for BC. We propose miR-29c-3p as a normalizer for miRNA studies in BC urine. This is the first study that characterizes a reliable normalizer that may allow the comparison of future urine miRNA studies as non-invasive biomarkers for BC diagnosis and monitoring. MDPI 2020-10-22 /pmc/articles/PMC7690381/ /pubmed/33105660 http://dx.doi.org/10.3390/biomedicines8110447 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Oto, Julia Plana, Emma Fernández-Pardo, Álvaro Cana, Fernando Martínez-Sarmiento, Manuel Vera-Donoso, César D. España, Francisco Medina, Pilar Identification of miR-29c-3p as a Robust Normalizer for Urine microRNA Studies in Bladder Cancer |
title | Identification of miR-29c-3p as a Robust Normalizer for Urine microRNA Studies in Bladder Cancer |
title_full | Identification of miR-29c-3p as a Robust Normalizer for Urine microRNA Studies in Bladder Cancer |
title_fullStr | Identification of miR-29c-3p as a Robust Normalizer for Urine microRNA Studies in Bladder Cancer |
title_full_unstemmed | Identification of miR-29c-3p as a Robust Normalizer for Urine microRNA Studies in Bladder Cancer |
title_short | Identification of miR-29c-3p as a Robust Normalizer for Urine microRNA Studies in Bladder Cancer |
title_sort | identification of mir-29c-3p as a robust normalizer for urine microrna studies in bladder cancer |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7690381/ https://www.ncbi.nlm.nih.gov/pubmed/33105660 http://dx.doi.org/10.3390/biomedicines8110447 |
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