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Identification of miR-29c-3p as a Robust Normalizer for Urine microRNA Studies in Bladder Cancer

Bladder cancer (BC) is among the most frequent malignancies worldwide, being the most expensive cancer to treat and monitor and the most lethal urological cancer. Urine microRNAs (miRNAs) have been proposed as novel non-invasive biomarkers to early diagnose and monitor BC patients in order to avoid...

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Autores principales: Oto, Julia, Plana, Emma, Fernández-Pardo, Álvaro, Cana, Fernando, Martínez-Sarmiento, Manuel, Vera-Donoso, César D., España, Francisco, Medina, Pilar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7690381/
https://www.ncbi.nlm.nih.gov/pubmed/33105660
http://dx.doi.org/10.3390/biomedicines8110447
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author Oto, Julia
Plana, Emma
Fernández-Pardo, Álvaro
Cana, Fernando
Martínez-Sarmiento, Manuel
Vera-Donoso, César D.
España, Francisco
Medina, Pilar
author_facet Oto, Julia
Plana, Emma
Fernández-Pardo, Álvaro
Cana, Fernando
Martínez-Sarmiento, Manuel
Vera-Donoso, César D.
España, Francisco
Medina, Pilar
author_sort Oto, Julia
collection PubMed
description Bladder cancer (BC) is among the most frequent malignancies worldwide, being the most expensive cancer to treat and monitor and the most lethal urological cancer. Urine microRNAs (miRNAs) have been proposed as novel non-invasive biomarkers to early diagnose and monitor BC patients in order to avoid the performance of current aggressive diagnostic techniques. However, huge discrepancies arise among studies mainly due to the lack of standardization in the normalization, a crucial step in all miRNA studies. Our aim was to identify the best miRNA normalizer for miRNA studies in urine of BC patients. We evaluated the performance of 110 candidate miRNAs in urine of 35 BC patients and 15 healthy controls by Real Time quantitative Polymerase Chain Reaction (RT-qPCR) followed by a stability analysis with RefFinder. In this screening stage, miR-29c-3p arose as the most stably expressed miRNA in BC and controls, with a good expression level. Stability of miR-29c-3p expression was validated in an independent cohort of 153 BC patients and 57 controls. Finally, we evaluated the robustness of miR-29c-3p as normalizer in the expression study of miR-200c-3p, a potential diagnostic marker for BC. We propose miR-29c-3p as a normalizer for miRNA studies in BC urine. This is the first study that characterizes a reliable normalizer that may allow the comparison of future urine miRNA studies as non-invasive biomarkers for BC diagnosis and monitoring.
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spelling pubmed-76903812020-11-27 Identification of miR-29c-3p as a Robust Normalizer for Urine microRNA Studies in Bladder Cancer Oto, Julia Plana, Emma Fernández-Pardo, Álvaro Cana, Fernando Martínez-Sarmiento, Manuel Vera-Donoso, César D. España, Francisco Medina, Pilar Biomedicines Article Bladder cancer (BC) is among the most frequent malignancies worldwide, being the most expensive cancer to treat and monitor and the most lethal urological cancer. Urine microRNAs (miRNAs) have been proposed as novel non-invasive biomarkers to early diagnose and monitor BC patients in order to avoid the performance of current aggressive diagnostic techniques. However, huge discrepancies arise among studies mainly due to the lack of standardization in the normalization, a crucial step in all miRNA studies. Our aim was to identify the best miRNA normalizer for miRNA studies in urine of BC patients. We evaluated the performance of 110 candidate miRNAs in urine of 35 BC patients and 15 healthy controls by Real Time quantitative Polymerase Chain Reaction (RT-qPCR) followed by a stability analysis with RefFinder. In this screening stage, miR-29c-3p arose as the most stably expressed miRNA in BC and controls, with a good expression level. Stability of miR-29c-3p expression was validated in an independent cohort of 153 BC patients and 57 controls. Finally, we evaluated the robustness of miR-29c-3p as normalizer in the expression study of miR-200c-3p, a potential diagnostic marker for BC. We propose miR-29c-3p as a normalizer for miRNA studies in BC urine. This is the first study that characterizes a reliable normalizer that may allow the comparison of future urine miRNA studies as non-invasive biomarkers for BC diagnosis and monitoring. MDPI 2020-10-22 /pmc/articles/PMC7690381/ /pubmed/33105660 http://dx.doi.org/10.3390/biomedicines8110447 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Oto, Julia
Plana, Emma
Fernández-Pardo, Álvaro
Cana, Fernando
Martínez-Sarmiento, Manuel
Vera-Donoso, César D.
España, Francisco
Medina, Pilar
Identification of miR-29c-3p as a Robust Normalizer for Urine microRNA Studies in Bladder Cancer
title Identification of miR-29c-3p as a Robust Normalizer for Urine microRNA Studies in Bladder Cancer
title_full Identification of miR-29c-3p as a Robust Normalizer for Urine microRNA Studies in Bladder Cancer
title_fullStr Identification of miR-29c-3p as a Robust Normalizer for Urine microRNA Studies in Bladder Cancer
title_full_unstemmed Identification of miR-29c-3p as a Robust Normalizer for Urine microRNA Studies in Bladder Cancer
title_short Identification of miR-29c-3p as a Robust Normalizer for Urine microRNA Studies in Bladder Cancer
title_sort identification of mir-29c-3p as a robust normalizer for urine microrna studies in bladder cancer
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7690381/
https://www.ncbi.nlm.nih.gov/pubmed/33105660
http://dx.doi.org/10.3390/biomedicines8110447
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