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Soil Microbial Communities Associated With Biodegradable Plastic Mulch Films

Agricultural plastic mulch films provide a favorable soil microclimate for plant growth, improving crop yields. Biodegradable plastic mulch films (BDMs) have emerged as a sustainable alternative to widely used non-biodegradable polyethylene (PE) films. BDMs are tilled into the soil after use and are...

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Autores principales: Bandopadhyay, Sreejata, Liquet y González, José E., Henderson, Kelsey B., Anunciado, Marife B., Hayes, Douglas G., DeBruyn, Jennifer M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7691482/
https://www.ncbi.nlm.nih.gov/pubmed/33281783
http://dx.doi.org/10.3389/fmicb.2020.587074
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author Bandopadhyay, Sreejata
Liquet y González, José E.
Henderson, Kelsey B.
Anunciado, Marife B.
Hayes, Douglas G.
DeBruyn, Jennifer M.
author_facet Bandopadhyay, Sreejata
Liquet y González, José E.
Henderson, Kelsey B.
Anunciado, Marife B.
Hayes, Douglas G.
DeBruyn, Jennifer M.
author_sort Bandopadhyay, Sreejata
collection PubMed
description Agricultural plastic mulch films provide a favorable soil microclimate for plant growth, improving crop yields. Biodegradable plastic mulch films (BDMs) have emerged as a sustainable alternative to widely used non-biodegradable polyethylene (PE) films. BDMs are tilled into the soil after use and are expected to biodegrade under field conditions. However, little is known about the microbes involved in biodegradation and the relationships between microbes and plastics in soils. In order to capture the consortium of soil microbes associated with (and thus likely degrading) BDMs, agriculturally-weathered plastics from two locations were studied alongside laboratory enrichment experiments to assess differences in the microbial communities associated with BDMs and PE films. Using a combination of amplicon sequencing and quantitative PCR (qPCR), we observed that agriculturally-weathered plastics hosted an enrichment of fungi and an altered bacterial community composition compared to the surrounding soil. Notably, Methylobacterium, Arthrobacter, and Sphingomonas were enriched on BDMs compared to non-biodegradable PE. In laboratory enrichment cultures, microbial consortia were able to degrade the plastics, and the composition of the microbial communities was influenced by the composition of the BDMs. Our initial characterization of the microbial communities associated with biodegradable plastic mulch films, or the biodegradable “plastisphere,” lays the groundwork for understanding biodegradation dynamics of biodegradable plastics in the environment.
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spelling pubmed-76914822020-12-04 Soil Microbial Communities Associated With Biodegradable Plastic Mulch Films Bandopadhyay, Sreejata Liquet y González, José E. Henderson, Kelsey B. Anunciado, Marife B. Hayes, Douglas G. DeBruyn, Jennifer M. Front Microbiol Microbiology Agricultural plastic mulch films provide a favorable soil microclimate for plant growth, improving crop yields. Biodegradable plastic mulch films (BDMs) have emerged as a sustainable alternative to widely used non-biodegradable polyethylene (PE) films. BDMs are tilled into the soil after use and are expected to biodegrade under field conditions. However, little is known about the microbes involved in biodegradation and the relationships between microbes and plastics in soils. In order to capture the consortium of soil microbes associated with (and thus likely degrading) BDMs, agriculturally-weathered plastics from two locations were studied alongside laboratory enrichment experiments to assess differences in the microbial communities associated with BDMs and PE films. Using a combination of amplicon sequencing and quantitative PCR (qPCR), we observed that agriculturally-weathered plastics hosted an enrichment of fungi and an altered bacterial community composition compared to the surrounding soil. Notably, Methylobacterium, Arthrobacter, and Sphingomonas were enriched on BDMs compared to non-biodegradable PE. In laboratory enrichment cultures, microbial consortia were able to degrade the plastics, and the composition of the microbial communities was influenced by the composition of the BDMs. Our initial characterization of the microbial communities associated with biodegradable plastic mulch films, or the biodegradable “plastisphere,” lays the groundwork for understanding biodegradation dynamics of biodegradable plastics in the environment. Frontiers Media S.A. 2020-11-13 /pmc/articles/PMC7691482/ /pubmed/33281783 http://dx.doi.org/10.3389/fmicb.2020.587074 Text en Copyright © 2020 Bandopadhyay, Liquet y González, Henderson, Anunciado, Hayes and DeBruyn. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Bandopadhyay, Sreejata
Liquet y González, José E.
Henderson, Kelsey B.
Anunciado, Marife B.
Hayes, Douglas G.
DeBruyn, Jennifer M.
Soil Microbial Communities Associated With Biodegradable Plastic Mulch Films
title Soil Microbial Communities Associated With Biodegradable Plastic Mulch Films
title_full Soil Microbial Communities Associated With Biodegradable Plastic Mulch Films
title_fullStr Soil Microbial Communities Associated With Biodegradable Plastic Mulch Films
title_full_unstemmed Soil Microbial Communities Associated With Biodegradable Plastic Mulch Films
title_short Soil Microbial Communities Associated With Biodegradable Plastic Mulch Films
title_sort soil microbial communities associated with biodegradable plastic mulch films
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7691482/
https://www.ncbi.nlm.nih.gov/pubmed/33281783
http://dx.doi.org/10.3389/fmicb.2020.587074
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