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DPM1 expression as a potential prognostic tumor marker in hepatocellular carcinoma

BACKGROUND: Altered glycosylation of proteins contributes to tumor progression. Dolichol phosphate mannose synthase (DPMS), an essential mannosyltransferase, plays a central role in post-translational modification of proteins, including N-linked glycoproteins, O-mannosylation, C-mannosylation and gl...

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Autores principales: Li, Ming, Xia, Shengli, Shi, Ping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7694566/
https://www.ncbi.nlm.nih.gov/pubmed/33282554
http://dx.doi.org/10.7717/peerj.10307
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author Li, Ming
Xia, Shengli
Shi, Ping
author_facet Li, Ming
Xia, Shengli
Shi, Ping
author_sort Li, Ming
collection PubMed
description BACKGROUND: Altered glycosylation of proteins contributes to tumor progression. Dolichol phosphate mannose synthase (DPMS), an essential mannosyltransferase, plays a central role in post-translational modification of proteins, including N-linked glycoproteins, O-mannosylation, C-mannosylation and glycosylphosphatidylinositol anchors synthesis. Little is known about the function of DPMS in liver cancer. METHODS: The study explored the roles of DPMS in the prognosis of hepatocellular carcinoma using UALCAN, Human Protein Atlas, GEPIA, cBioPortal and Metascape databases. The mRNA expressions of DPM1/2/3 also were detected by quantitative real-time PCR experiments in vitro. RESULTS: The transcriptional and proteinic expressions of DPM1/2/3 were both over-expressed in patients with hepatocellular carcinoma. Over-expressions of DPMS were discovered to be dramatically associated with clinical cancer stages and pathological tumor grades in hepatocellular carcinoma patients. In addition, higher mRNA expressions of DPM1/2/3 were found to be significantly related to shorter overall survival in liver cancer patients. Futhermore, high genetic alteration rate of DPMS (41%) was also observed in patients with liver cancer, and genetic alteration in DPMS was associated with shorter overall survival in hepatocellular carcinoma patients. We also performed quantitative real-time PCR experiments in human normal hepatocytes and hepatoma cells to verify the expressions of DPM1/2/3 and results showed that the expression of DPM1 was significantly increased in hepatoma cells SMMC-7721 and HepG2. CONCLUSIONS: Taken together, these results suggested that DPM1 could be a potential prognostic biomarker for survivals of hepatocellular carcinoma patients.
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spelling pubmed-76945662020-12-04 DPM1 expression as a potential prognostic tumor marker in hepatocellular carcinoma Li, Ming Xia, Shengli Shi, Ping PeerJ Bioinformatics BACKGROUND: Altered glycosylation of proteins contributes to tumor progression. Dolichol phosphate mannose synthase (DPMS), an essential mannosyltransferase, plays a central role in post-translational modification of proteins, including N-linked glycoproteins, O-mannosylation, C-mannosylation and glycosylphosphatidylinositol anchors synthesis. Little is known about the function of DPMS in liver cancer. METHODS: The study explored the roles of DPMS in the prognosis of hepatocellular carcinoma using UALCAN, Human Protein Atlas, GEPIA, cBioPortal and Metascape databases. The mRNA expressions of DPM1/2/3 also were detected by quantitative real-time PCR experiments in vitro. RESULTS: The transcriptional and proteinic expressions of DPM1/2/3 were both over-expressed in patients with hepatocellular carcinoma. Over-expressions of DPMS were discovered to be dramatically associated with clinical cancer stages and pathological tumor grades in hepatocellular carcinoma patients. In addition, higher mRNA expressions of DPM1/2/3 were found to be significantly related to shorter overall survival in liver cancer patients. Futhermore, high genetic alteration rate of DPMS (41%) was also observed in patients with liver cancer, and genetic alteration in DPMS was associated with shorter overall survival in hepatocellular carcinoma patients. We also performed quantitative real-time PCR experiments in human normal hepatocytes and hepatoma cells to verify the expressions of DPM1/2/3 and results showed that the expression of DPM1 was significantly increased in hepatoma cells SMMC-7721 and HepG2. CONCLUSIONS: Taken together, these results suggested that DPM1 could be a potential prognostic biomarker for survivals of hepatocellular carcinoma patients. PeerJ Inc. 2020-11-24 /pmc/articles/PMC7694566/ /pubmed/33282554 http://dx.doi.org/10.7717/peerj.10307 Text en ©2020 Li et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Bioinformatics
Li, Ming
Xia, Shengli
Shi, Ping
DPM1 expression as a potential prognostic tumor marker in hepatocellular carcinoma
title DPM1 expression as a potential prognostic tumor marker in hepatocellular carcinoma
title_full DPM1 expression as a potential prognostic tumor marker in hepatocellular carcinoma
title_fullStr DPM1 expression as a potential prognostic tumor marker in hepatocellular carcinoma
title_full_unstemmed DPM1 expression as a potential prognostic tumor marker in hepatocellular carcinoma
title_short DPM1 expression as a potential prognostic tumor marker in hepatocellular carcinoma
title_sort dpm1 expression as a potential prognostic tumor marker in hepatocellular carcinoma
topic Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7694566/
https://www.ncbi.nlm.nih.gov/pubmed/33282554
http://dx.doi.org/10.7717/peerj.10307
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