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Prognostic roles of metabolic reprogramming-associated genes in patients with hepatocellular carcinoma
Metabolic reprogramming for adaptation to the tumor microenvironment is recognized as a hallmark of cancer. Although many altered metabolic genes have been reported to be associated with tumor pathological processes, systematic analysis of metabolic genes implicated in hepatocellular carcinoma progn...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7695384/ https://www.ncbi.nlm.nih.gov/pubmed/33188160 http://dx.doi.org/10.18632/aging.104122 |
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author | Cui, Lijuan Xue, Huan Wen, Zhitong Lu, Zhihong Liu, Yunfeng Zhang, Yi |
author_facet | Cui, Lijuan Xue, Huan Wen, Zhitong Lu, Zhihong Liu, Yunfeng Zhang, Yi |
author_sort | Cui, Lijuan |
collection | PubMed |
description | Metabolic reprogramming for adaptation to the tumor microenvironment is recognized as a hallmark of cancer. Although many altered metabolic genes have been reported to be associated with tumor pathological processes, systematic analysis of metabolic genes implicated in hepatocellular carcinoma prognosis remains rare. The aim of this study was to identify key metabolic genes related to hepatocellular carcinoma, and to explore their clinical significance. We downloaded mRNA expression profiles and clinical hepatocellular carcinoma data from The Cancer Genome Atlas database to explore the prognostic roles of metabolic genes. Five prognosis-associated metabolic genes, including POLA1, UCK2, ACYP1, ENTPD2, and TXNRD1, were screened via univariate Cox regression analysis and a LASSO Cox regression model, which divided patients into high- and low-risk groups. Furthermore, gene set enrichment analysis revealed that significantly-enriched gene ontology terms and pathways involving high-risk patients were focused on regulation of nucleic and fatty acid metabolism. Taken together, our study identified five metabolic genes related to survival, which can be used to predict the prognosis of patients with hepatocellular carcinoma. These genes may play essential roles in metabolic microenvironment regulation, and represent potentially important candidate targets in metabolic therapy. |
format | Online Article Text |
id | pubmed-7695384 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-76953842020-12-04 Prognostic roles of metabolic reprogramming-associated genes in patients with hepatocellular carcinoma Cui, Lijuan Xue, Huan Wen, Zhitong Lu, Zhihong Liu, Yunfeng Zhang, Yi Aging (Albany NY) Research Paper Metabolic reprogramming for adaptation to the tumor microenvironment is recognized as a hallmark of cancer. Although many altered metabolic genes have been reported to be associated with tumor pathological processes, systematic analysis of metabolic genes implicated in hepatocellular carcinoma prognosis remains rare. The aim of this study was to identify key metabolic genes related to hepatocellular carcinoma, and to explore their clinical significance. We downloaded mRNA expression profiles and clinical hepatocellular carcinoma data from The Cancer Genome Atlas database to explore the prognostic roles of metabolic genes. Five prognosis-associated metabolic genes, including POLA1, UCK2, ACYP1, ENTPD2, and TXNRD1, were screened via univariate Cox regression analysis and a LASSO Cox regression model, which divided patients into high- and low-risk groups. Furthermore, gene set enrichment analysis revealed that significantly-enriched gene ontology terms and pathways involving high-risk patients were focused on regulation of nucleic and fatty acid metabolism. Taken together, our study identified five metabolic genes related to survival, which can be used to predict the prognosis of patients with hepatocellular carcinoma. These genes may play essential roles in metabolic microenvironment regulation, and represent potentially important candidate targets in metabolic therapy. Impact Journals 2020-11-12 /pmc/articles/PMC7695384/ /pubmed/33188160 http://dx.doi.org/10.18632/aging.104122 Text en Copyright: © 2020 Cui et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Cui, Lijuan Xue, Huan Wen, Zhitong Lu, Zhihong Liu, Yunfeng Zhang, Yi Prognostic roles of metabolic reprogramming-associated genes in patients with hepatocellular carcinoma |
title | Prognostic roles of metabolic reprogramming-associated genes in patients with hepatocellular carcinoma |
title_full | Prognostic roles of metabolic reprogramming-associated genes in patients with hepatocellular carcinoma |
title_fullStr | Prognostic roles of metabolic reprogramming-associated genes in patients with hepatocellular carcinoma |
title_full_unstemmed | Prognostic roles of metabolic reprogramming-associated genes in patients with hepatocellular carcinoma |
title_short | Prognostic roles of metabolic reprogramming-associated genes in patients with hepatocellular carcinoma |
title_sort | prognostic roles of metabolic reprogramming-associated genes in patients with hepatocellular carcinoma |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7695384/ https://www.ncbi.nlm.nih.gov/pubmed/33188160 http://dx.doi.org/10.18632/aging.104122 |
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