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Aging-related changes in the gene expression profile of human lungs

Aging is a multifactorial process that leads to molecular and cellular changes, contributing to the susceptibility of most lung diseases. However, the molecular and genetic mechanism of lung aging remains poorly understood. Here, we performed RNA-seq transcriptome analysis of the lung tissues of 68...

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Autores principales: Jeong, Ina, Lim, Jae-Hyun, Park, Jin-Soo, Oh, Yeon-Mok
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7695411/
https://www.ncbi.nlm.nih.gov/pubmed/33168785
http://dx.doi.org/10.18632/aging.103885
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author Jeong, Ina
Lim, Jae-Hyun
Park, Jin-Soo
Oh, Yeon-Mok
author_facet Jeong, Ina
Lim, Jae-Hyun
Park, Jin-Soo
Oh, Yeon-Mok
author_sort Jeong, Ina
collection PubMed
description Aging is a multifactorial process that leads to molecular and cellular changes, contributing to the susceptibility of most lung diseases. However, the molecular and genetic mechanism of lung aging remains poorly understood. Here, we performed RNA-seq transcriptome analysis of the lung tissues of 68 subjects and analyzed their gene expression profile to evaluate candidate genes related to lung aging. The subjects were classified into two groups (Younger group and Older group) based on their age. Lung tissues were obtained from surgically resected specimens, processed, and analyzed with RNA-seq. The median age of the subjects was 45 years in the Younger group and 74 years in the Older group. Around 71% and 53% of the subjects were female in the Younger and Older groups, respectively. After gene quality control and filtering, differentially expressed gene analysis showed that MAP3K15, CHRM2, and GALNT13 were upregulated in the Younger group, whereas COL17A1 and EDA2R were upregulated in the Older group. Multivariate analysis with adjustment for covariates showed that EDA2R was a risk factor for lung aging. Our study identified differences in the gene expression of the lungs of older subjects compared with younger subjects. These findings may have implications in lung aging.
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spelling pubmed-76954112020-12-04 Aging-related changes in the gene expression profile of human lungs Jeong, Ina Lim, Jae-Hyun Park, Jin-Soo Oh, Yeon-Mok Aging (Albany NY) Research Paper Aging is a multifactorial process that leads to molecular and cellular changes, contributing to the susceptibility of most lung diseases. However, the molecular and genetic mechanism of lung aging remains poorly understood. Here, we performed RNA-seq transcriptome analysis of the lung tissues of 68 subjects and analyzed their gene expression profile to evaluate candidate genes related to lung aging. The subjects were classified into two groups (Younger group and Older group) based on their age. Lung tissues were obtained from surgically resected specimens, processed, and analyzed with RNA-seq. The median age of the subjects was 45 years in the Younger group and 74 years in the Older group. Around 71% and 53% of the subjects were female in the Younger and Older groups, respectively. After gene quality control and filtering, differentially expressed gene analysis showed that MAP3K15, CHRM2, and GALNT13 were upregulated in the Younger group, whereas COL17A1 and EDA2R were upregulated in the Older group. Multivariate analysis with adjustment for covariates showed that EDA2R was a risk factor for lung aging. Our study identified differences in the gene expression of the lungs of older subjects compared with younger subjects. These findings may have implications in lung aging. Impact Journals 2020-11-09 /pmc/articles/PMC7695411/ /pubmed/33168785 http://dx.doi.org/10.18632/aging.103885 Text en Copyright: © 2020 Jeong et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Jeong, Ina
Lim, Jae-Hyun
Park, Jin-Soo
Oh, Yeon-Mok
Aging-related changes in the gene expression profile of human lungs
title Aging-related changes in the gene expression profile of human lungs
title_full Aging-related changes in the gene expression profile of human lungs
title_fullStr Aging-related changes in the gene expression profile of human lungs
title_full_unstemmed Aging-related changes in the gene expression profile of human lungs
title_short Aging-related changes in the gene expression profile of human lungs
title_sort aging-related changes in the gene expression profile of human lungs
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7695411/
https://www.ncbi.nlm.nih.gov/pubmed/33168785
http://dx.doi.org/10.18632/aging.103885
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