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Autophagy-related long noncoding RNAs can predict prognosis in patients with bladder cancer
We investigated whether autophagy-related long noncoding RNAs (lncRNAs) can predict prognosis in bladder cancer. We obtained bladder cancer lncRNA data from The Cancer Genome Atlas and autophagy-related genes from the Human Autophagy Database. Fifteen autophagy-related lncRNAs with prognostic signif...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7695412/ https://www.ncbi.nlm.nih.gov/pubmed/33175697 http://dx.doi.org/10.18632/aging.103947 |
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author | Lai, Cong Wu, Zhenyu Shi, Juanyi Li, Kaiwen Zhu, Jiamin Chen, Zhenhong Liu, Cheng Xu, Kewei |
author_facet | Lai, Cong Wu, Zhenyu Shi, Juanyi Li, Kaiwen Zhu, Jiamin Chen, Zhenhong Liu, Cheng Xu, Kewei |
author_sort | Lai, Cong |
collection | PubMed |
description | We investigated whether autophagy-related long noncoding RNAs (lncRNAs) can predict prognosis in bladder cancer. We obtained bladder cancer lncRNA data from The Cancer Genome Atlas and autophagy-related genes from the Human Autophagy Database. Fifteen autophagy-related lncRNAs with prognostic significance were identified. Multivariate Cox analysis was used to construct a risk score model, which divided bladder cancer patients into high-risk and low-risk groups. We found that patients in the low-risk group had better survival than those in the high-risk group. Subgroup analysis showed that patients in the high-risk group also had worse OS than that in the low-risk group in subgroups based on age, gender, clinical stage, and TNM stage. We next established a nomogram according to the results of multivariate Cox regression, which included age, gender, clinical stage, TNM stage, and risk score. The area under the curve for 3- and 5-year overall survival predicted by the nomogram were 0.711 and 0.719, respectively. Bioinformatics analysis demonstrated that the 15 identified lncRNAs are involved in the cell cycle, DNA replication, cell adhesion, cancer pathway, WNT signaling pathway, and oxidative stress. These findings confirm that autophagy-related lncRNAs are predictive of prognosis in bladder cancer patients and may affect tumor progression. |
format | Online Article Text |
id | pubmed-7695412 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-76954122020-12-04 Autophagy-related long noncoding RNAs can predict prognosis in patients with bladder cancer Lai, Cong Wu, Zhenyu Shi, Juanyi Li, Kaiwen Zhu, Jiamin Chen, Zhenhong Liu, Cheng Xu, Kewei Aging (Albany NY) Research Paper We investigated whether autophagy-related long noncoding RNAs (lncRNAs) can predict prognosis in bladder cancer. We obtained bladder cancer lncRNA data from The Cancer Genome Atlas and autophagy-related genes from the Human Autophagy Database. Fifteen autophagy-related lncRNAs with prognostic significance were identified. Multivariate Cox analysis was used to construct a risk score model, which divided bladder cancer patients into high-risk and low-risk groups. We found that patients in the low-risk group had better survival than those in the high-risk group. Subgroup analysis showed that patients in the high-risk group also had worse OS than that in the low-risk group in subgroups based on age, gender, clinical stage, and TNM stage. We next established a nomogram according to the results of multivariate Cox regression, which included age, gender, clinical stage, TNM stage, and risk score. The area under the curve for 3- and 5-year overall survival predicted by the nomogram were 0.711 and 0.719, respectively. Bioinformatics analysis demonstrated that the 15 identified lncRNAs are involved in the cell cycle, DNA replication, cell adhesion, cancer pathway, WNT signaling pathway, and oxidative stress. These findings confirm that autophagy-related lncRNAs are predictive of prognosis in bladder cancer patients and may affect tumor progression. Impact Journals 2020-11-07 /pmc/articles/PMC7695412/ /pubmed/33175697 http://dx.doi.org/10.18632/aging.103947 Text en Copyright: © 2020 Lai et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Lai, Cong Wu, Zhenyu Shi, Juanyi Li, Kaiwen Zhu, Jiamin Chen, Zhenhong Liu, Cheng Xu, Kewei Autophagy-related long noncoding RNAs can predict prognosis in patients with bladder cancer |
title | Autophagy-related long noncoding RNAs can predict prognosis in patients with bladder cancer |
title_full | Autophagy-related long noncoding RNAs can predict prognosis in patients with bladder cancer |
title_fullStr | Autophagy-related long noncoding RNAs can predict prognosis in patients with bladder cancer |
title_full_unstemmed | Autophagy-related long noncoding RNAs can predict prognosis in patients with bladder cancer |
title_short | Autophagy-related long noncoding RNAs can predict prognosis in patients with bladder cancer |
title_sort | autophagy-related long noncoding rnas can predict prognosis in patients with bladder cancer |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7695412/ https://www.ncbi.nlm.nih.gov/pubmed/33175697 http://dx.doi.org/10.18632/aging.103947 |
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