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Autophagy-related long noncoding RNAs can predict prognosis in patients with bladder cancer

We investigated whether autophagy-related long noncoding RNAs (lncRNAs) can predict prognosis in bladder cancer. We obtained bladder cancer lncRNA data from The Cancer Genome Atlas and autophagy-related genes from the Human Autophagy Database. Fifteen autophagy-related lncRNAs with prognostic signif...

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Autores principales: Lai, Cong, Wu, Zhenyu, Shi, Juanyi, Li, Kaiwen, Zhu, Jiamin, Chen, Zhenhong, Liu, Cheng, Xu, Kewei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7695412/
https://www.ncbi.nlm.nih.gov/pubmed/33175697
http://dx.doi.org/10.18632/aging.103947
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author Lai, Cong
Wu, Zhenyu
Shi, Juanyi
Li, Kaiwen
Zhu, Jiamin
Chen, Zhenhong
Liu, Cheng
Xu, Kewei
author_facet Lai, Cong
Wu, Zhenyu
Shi, Juanyi
Li, Kaiwen
Zhu, Jiamin
Chen, Zhenhong
Liu, Cheng
Xu, Kewei
author_sort Lai, Cong
collection PubMed
description We investigated whether autophagy-related long noncoding RNAs (lncRNAs) can predict prognosis in bladder cancer. We obtained bladder cancer lncRNA data from The Cancer Genome Atlas and autophagy-related genes from the Human Autophagy Database. Fifteen autophagy-related lncRNAs with prognostic significance were identified. Multivariate Cox analysis was used to construct a risk score model, which divided bladder cancer patients into high-risk and low-risk groups. We found that patients in the low-risk group had better survival than those in the high-risk group. Subgroup analysis showed that patients in the high-risk group also had worse OS than that in the low-risk group in subgroups based on age, gender, clinical stage, and TNM stage. We next established a nomogram according to the results of multivariate Cox regression, which included age, gender, clinical stage, TNM stage, and risk score. The area under the curve for 3- and 5-year overall survival predicted by the nomogram were 0.711 and 0.719, respectively. Bioinformatics analysis demonstrated that the 15 identified lncRNAs are involved in the cell cycle, DNA replication, cell adhesion, cancer pathway, WNT signaling pathway, and oxidative stress. These findings confirm that autophagy-related lncRNAs are predictive of prognosis in bladder cancer patients and may affect tumor progression.
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spelling pubmed-76954122020-12-04 Autophagy-related long noncoding RNAs can predict prognosis in patients with bladder cancer Lai, Cong Wu, Zhenyu Shi, Juanyi Li, Kaiwen Zhu, Jiamin Chen, Zhenhong Liu, Cheng Xu, Kewei Aging (Albany NY) Research Paper We investigated whether autophagy-related long noncoding RNAs (lncRNAs) can predict prognosis in bladder cancer. We obtained bladder cancer lncRNA data from The Cancer Genome Atlas and autophagy-related genes from the Human Autophagy Database. Fifteen autophagy-related lncRNAs with prognostic significance were identified. Multivariate Cox analysis was used to construct a risk score model, which divided bladder cancer patients into high-risk and low-risk groups. We found that patients in the low-risk group had better survival than those in the high-risk group. Subgroup analysis showed that patients in the high-risk group also had worse OS than that in the low-risk group in subgroups based on age, gender, clinical stage, and TNM stage. We next established a nomogram according to the results of multivariate Cox regression, which included age, gender, clinical stage, TNM stage, and risk score. The area under the curve for 3- and 5-year overall survival predicted by the nomogram were 0.711 and 0.719, respectively. Bioinformatics analysis demonstrated that the 15 identified lncRNAs are involved in the cell cycle, DNA replication, cell adhesion, cancer pathway, WNT signaling pathway, and oxidative stress. These findings confirm that autophagy-related lncRNAs are predictive of prognosis in bladder cancer patients and may affect tumor progression. Impact Journals 2020-11-07 /pmc/articles/PMC7695412/ /pubmed/33175697 http://dx.doi.org/10.18632/aging.103947 Text en Copyright: © 2020 Lai et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Lai, Cong
Wu, Zhenyu
Shi, Juanyi
Li, Kaiwen
Zhu, Jiamin
Chen, Zhenhong
Liu, Cheng
Xu, Kewei
Autophagy-related long noncoding RNAs can predict prognosis in patients with bladder cancer
title Autophagy-related long noncoding RNAs can predict prognosis in patients with bladder cancer
title_full Autophagy-related long noncoding RNAs can predict prognosis in patients with bladder cancer
title_fullStr Autophagy-related long noncoding RNAs can predict prognosis in patients with bladder cancer
title_full_unstemmed Autophagy-related long noncoding RNAs can predict prognosis in patients with bladder cancer
title_short Autophagy-related long noncoding RNAs can predict prognosis in patients with bladder cancer
title_sort autophagy-related long noncoding rnas can predict prognosis in patients with bladder cancer
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7695412/
https://www.ncbi.nlm.nih.gov/pubmed/33175697
http://dx.doi.org/10.18632/aging.103947
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