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Interpolated functional manifold for functional near-infrared spectroscopy analysis at group level
Significance: Solutions for group-level analysis of connectivity from fNIRS observations exist, but groupwise explorative analysis with classical solutions is often cumbersome. Manifold-based solutions excel at data exploration, but there are infinite surfaces crossing the observations cloud of poin...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Society of Photo-Optical Instrumentation Engineers
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7695443/ https://www.ncbi.nlm.nih.gov/pubmed/33269300 http://dx.doi.org/10.1117/1.NPh.7.4.045009 |
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author | Ávila-Sansores, Shender-María Rodríguez-Gómez, Gustavo Tachtsidis, Ilias Orihuela-Espina, Felipe |
author_facet | Ávila-Sansores, Shender-María Rodríguez-Gómez, Gustavo Tachtsidis, Ilias Orihuela-Espina, Felipe |
author_sort | Ávila-Sansores, Shender-María |
collection | PubMed |
description | Significance: Solutions for group-level analysis of connectivity from fNIRS observations exist, but groupwise explorative analysis with classical solutions is often cumbersome. Manifold-based solutions excel at data exploration, but there are infinite surfaces crossing the observations cloud of points. Aim: We aim to provide a systematic choice of surface for a manifold-based analysis of connectivity at group level with small surface interpolation error. Approach: This research introduces interpolated functional manifold (IFM). IFM builds a manifold from reconstructed changes in concentrations of oxygenated [Formula: see text] and reduced [Formula: see text] hemoglobin species by means of radial basis functions (RBF). We evaluate the root mean square error (RMSE) associated to four families of RBF. We validated our model against psychophysiological interactions (PPI) analysis using the Jaccard index (JI). We demonstrate the usability in an experimental dataset of surgical neuroergonomics. Results: Lowest interpolation RMSE was [Formula: see text] for [Formula: see text] [A.U.] and [Formula: see text] [A.U.] for [Formula: see text]. Agreement with classical group analysis was [Formula: see text] for [Formula: see text]. Agreement with PPI analysis was [Formula: see text] for [Formula: see text] and [Formula: see text] for [Formula: see text]. IFM successfully decoded group differences [ANOVA: [Formula: see text]: [Formula: see text]; [Formula: see text]; [Formula: see text]: [Formula: see text]; [Formula: see text]]. Conclusions: IFM provides a pragmatic solution to the problem of choosing the manifold associated to a cloud of points, facilitating the use of manifold-based solutions for the group analysis of fNIRS datasets. |
format | Online Article Text |
id | pubmed-7695443 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Society of Photo-Optical Instrumentation Engineers |
record_format | MEDLINE/PubMed |
spelling | pubmed-76954432020-12-01 Interpolated functional manifold for functional near-infrared spectroscopy analysis at group level Ávila-Sansores, Shender-María Rodríguez-Gómez, Gustavo Tachtsidis, Ilias Orihuela-Espina, Felipe Neurophotonics Research Papers Significance: Solutions for group-level analysis of connectivity from fNIRS observations exist, but groupwise explorative analysis with classical solutions is often cumbersome. Manifold-based solutions excel at data exploration, but there are infinite surfaces crossing the observations cloud of points. Aim: We aim to provide a systematic choice of surface for a manifold-based analysis of connectivity at group level with small surface interpolation error. Approach: This research introduces interpolated functional manifold (IFM). IFM builds a manifold from reconstructed changes in concentrations of oxygenated [Formula: see text] and reduced [Formula: see text] hemoglobin species by means of radial basis functions (RBF). We evaluate the root mean square error (RMSE) associated to four families of RBF. We validated our model against psychophysiological interactions (PPI) analysis using the Jaccard index (JI). We demonstrate the usability in an experimental dataset of surgical neuroergonomics. Results: Lowest interpolation RMSE was [Formula: see text] for [Formula: see text] [A.U.] and [Formula: see text] [A.U.] for [Formula: see text]. Agreement with classical group analysis was [Formula: see text] for [Formula: see text]. Agreement with PPI analysis was [Formula: see text] for [Formula: see text] and [Formula: see text] for [Formula: see text]. IFM successfully decoded group differences [ANOVA: [Formula: see text]: [Formula: see text]; [Formula: see text]; [Formula: see text]: [Formula: see text]; [Formula: see text]]. Conclusions: IFM provides a pragmatic solution to the problem of choosing the manifold associated to a cloud of points, facilitating the use of manifold-based solutions for the group analysis of fNIRS datasets. Society of Photo-Optical Instrumentation Engineers 2020-11-27 2020-10 /pmc/articles/PMC7695443/ /pubmed/33269300 http://dx.doi.org/10.1117/1.NPh.7.4.045009 Text en © 2020 The Authors https://creativecommons.org/licenses/by/4.0/ Published by SPIE under a Creative Commons Attribution 4.0 Unported License. Distribution or reproduction of this work in whole or in part requires full attribution of the original publication, including its DOI. |
spellingShingle | Research Papers Ávila-Sansores, Shender-María Rodríguez-Gómez, Gustavo Tachtsidis, Ilias Orihuela-Espina, Felipe Interpolated functional manifold for functional near-infrared spectroscopy analysis at group level |
title | Interpolated functional manifold for functional near-infrared spectroscopy analysis at group level |
title_full | Interpolated functional manifold for functional near-infrared spectroscopy analysis at group level |
title_fullStr | Interpolated functional manifold for functional near-infrared spectroscopy analysis at group level |
title_full_unstemmed | Interpolated functional manifold for functional near-infrared spectroscopy analysis at group level |
title_short | Interpolated functional manifold for functional near-infrared spectroscopy analysis at group level |
title_sort | interpolated functional manifold for functional near-infrared spectroscopy analysis at group level |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7695443/ https://www.ncbi.nlm.nih.gov/pubmed/33269300 http://dx.doi.org/10.1117/1.NPh.7.4.045009 |
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