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Evaluating the performance of the Bayesian mixing tool MixSIAR with fatty acid data for quantitative estimation of diet
We test the performance of the Bayesian mixing model, MixSIAR, to quantitatively predict diets of consumers based on their fatty acids (FAs). The known diets of six species, undergoing controlled-feeding experiments, were compared with dietary predictions modelled from their FAs. Test subjects inclu...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7695706/ https://www.ncbi.nlm.nih.gov/pubmed/33247163 http://dx.doi.org/10.1038/s41598-020-77396-1 |
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author | Guerrero, Alicia I. Rogers, Tracey L. |
author_facet | Guerrero, Alicia I. Rogers, Tracey L. |
author_sort | Guerrero, Alicia I. |
collection | PubMed |
description | We test the performance of the Bayesian mixing model, MixSIAR, to quantitatively predict diets of consumers based on their fatty acids (FAs). The known diets of six species, undergoing controlled-feeding experiments, were compared with dietary predictions modelled from their FAs. Test subjects included fish, birds and mammals, and represent consumers with disparate FA compositions. We show that MixSIAR with FA data accurately identifies a consumer’s diet, the contribution of major prey items, when they change their diet (diet switching) and can detect an absent prey. Results were impacted if the consumer had a low-fat diet due to physiological constraints. Incorporating prior information on the potential prey species into the model improves model performance. Dietary predictions were reasonable even when using trophic modification values (calibration coefficients, CCs) derived from different prey. Models performed well when using CCs derived from consumers fed a varied diet or when using CC values averaged across diets. We demonstrate that MixSIAR with FAs is a powerful approach to correctly estimate diet, in particular if used to complement other methods. |
format | Online Article Text |
id | pubmed-7695706 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-76957062020-11-30 Evaluating the performance of the Bayesian mixing tool MixSIAR with fatty acid data for quantitative estimation of diet Guerrero, Alicia I. Rogers, Tracey L. Sci Rep Article We test the performance of the Bayesian mixing model, MixSIAR, to quantitatively predict diets of consumers based on their fatty acids (FAs). The known diets of six species, undergoing controlled-feeding experiments, were compared with dietary predictions modelled from their FAs. Test subjects included fish, birds and mammals, and represent consumers with disparate FA compositions. We show that MixSIAR with FA data accurately identifies a consumer’s diet, the contribution of major prey items, when they change their diet (diet switching) and can detect an absent prey. Results were impacted if the consumer had a low-fat diet due to physiological constraints. Incorporating prior information on the potential prey species into the model improves model performance. Dietary predictions were reasonable even when using trophic modification values (calibration coefficients, CCs) derived from different prey. Models performed well when using CCs derived from consumers fed a varied diet or when using CC values averaged across diets. We demonstrate that MixSIAR with FAs is a powerful approach to correctly estimate diet, in particular if used to complement other methods. Nature Publishing Group UK 2020-11-27 /pmc/articles/PMC7695706/ /pubmed/33247163 http://dx.doi.org/10.1038/s41598-020-77396-1 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Guerrero, Alicia I. Rogers, Tracey L. Evaluating the performance of the Bayesian mixing tool MixSIAR with fatty acid data for quantitative estimation of diet |
title | Evaluating the performance of the Bayesian mixing tool MixSIAR with fatty acid data for quantitative estimation of diet |
title_full | Evaluating the performance of the Bayesian mixing tool MixSIAR with fatty acid data for quantitative estimation of diet |
title_fullStr | Evaluating the performance of the Bayesian mixing tool MixSIAR with fatty acid data for quantitative estimation of diet |
title_full_unstemmed | Evaluating the performance of the Bayesian mixing tool MixSIAR with fatty acid data for quantitative estimation of diet |
title_short | Evaluating the performance of the Bayesian mixing tool MixSIAR with fatty acid data for quantitative estimation of diet |
title_sort | evaluating the performance of the bayesian mixing tool mixsiar with fatty acid data for quantitative estimation of diet |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7695706/ https://www.ncbi.nlm.nih.gov/pubmed/33247163 http://dx.doi.org/10.1038/s41598-020-77396-1 |
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