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The dehydrins gene expression differs across ecotypes in Norway spruce and relates to weather fluctuations
Norway spruce has a broad natural distribution range, which results in a substantial variety of its physiological and genetic variation. There are three distinct altitudinal ecotypes described in this tree species. The physiological optimum of each ecotype may be shifted due to ongoing climate chang...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7695824/ https://www.ncbi.nlm.nih.gov/pubmed/33247164 http://dx.doi.org/10.1038/s41598-020-76900-x |
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author | Čepl, Jaroslav Stejskal, Jan Korecký, Jiří Hejtmánek, Jakub Faltinová, Zuzana Lstibůrek, Milan Gezan, Salvador |
author_facet | Čepl, Jaroslav Stejskal, Jan Korecký, Jiří Hejtmánek, Jakub Faltinová, Zuzana Lstibůrek, Milan Gezan, Salvador |
author_sort | Čepl, Jaroslav |
collection | PubMed |
description | Norway spruce has a broad natural distribution range, which results in a substantial variety of its physiological and genetic variation. There are three distinct altitudinal ecotypes described in this tree species. The physiological optimum of each ecotype may be shifted due to ongoing climate change, especially in traits associated with water demand that might be crucial for adaptation. Dehydrins are proteins that help to mitigate the adverse effects of dehydration. Dehydrin gene expression patterns appeared to be a suitable marker for plant stress assessment. Genetically determined differences in response between individuals and populations were formerly studied, however, mainly in controlled conditions. We evaluated ecotypic variation in dehydrin gene expression in a clonal bank comprised of all three ecotypes. A genetic relationship among targeted trees was uncovered utilizing GBS (Genotyping by Sequencing) platform. We sampled 4–6 trees of each ecotype throughout 15 months period. Subsequently, we assessed the RNA expression of dehydrin genes by qRT-PCR. For this study, we deliberately selected dehydrins from different categories. Our findings detected significant differences among ecotypes in dehydrin expression. The association of recorded climatic variables and individual gene expression across the study period was evaluated and revealed, for certain genes, a correlation between dehydrin gene expression and precipitation, temperature, and day-length. |
format | Online Article Text |
id | pubmed-7695824 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-76958242020-11-30 The dehydrins gene expression differs across ecotypes in Norway spruce and relates to weather fluctuations Čepl, Jaroslav Stejskal, Jan Korecký, Jiří Hejtmánek, Jakub Faltinová, Zuzana Lstibůrek, Milan Gezan, Salvador Sci Rep Article Norway spruce has a broad natural distribution range, which results in a substantial variety of its physiological and genetic variation. There are three distinct altitudinal ecotypes described in this tree species. The physiological optimum of each ecotype may be shifted due to ongoing climate change, especially in traits associated with water demand that might be crucial for adaptation. Dehydrins are proteins that help to mitigate the adverse effects of dehydration. Dehydrin gene expression patterns appeared to be a suitable marker for plant stress assessment. Genetically determined differences in response between individuals and populations were formerly studied, however, mainly in controlled conditions. We evaluated ecotypic variation in dehydrin gene expression in a clonal bank comprised of all three ecotypes. A genetic relationship among targeted trees was uncovered utilizing GBS (Genotyping by Sequencing) platform. We sampled 4–6 trees of each ecotype throughout 15 months period. Subsequently, we assessed the RNA expression of dehydrin genes by qRT-PCR. For this study, we deliberately selected dehydrins from different categories. Our findings detected significant differences among ecotypes in dehydrin expression. The association of recorded climatic variables and individual gene expression across the study period was evaluated and revealed, for certain genes, a correlation between dehydrin gene expression and precipitation, temperature, and day-length. Nature Publishing Group UK 2020-11-27 /pmc/articles/PMC7695824/ /pubmed/33247164 http://dx.doi.org/10.1038/s41598-020-76900-x Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Čepl, Jaroslav Stejskal, Jan Korecký, Jiří Hejtmánek, Jakub Faltinová, Zuzana Lstibůrek, Milan Gezan, Salvador The dehydrins gene expression differs across ecotypes in Norway spruce and relates to weather fluctuations |
title | The dehydrins gene expression differs across ecotypes in Norway spruce and relates to weather fluctuations |
title_full | The dehydrins gene expression differs across ecotypes in Norway spruce and relates to weather fluctuations |
title_fullStr | The dehydrins gene expression differs across ecotypes in Norway spruce and relates to weather fluctuations |
title_full_unstemmed | The dehydrins gene expression differs across ecotypes in Norway spruce and relates to weather fluctuations |
title_short | The dehydrins gene expression differs across ecotypes in Norway spruce and relates to weather fluctuations |
title_sort | dehydrins gene expression differs across ecotypes in norway spruce and relates to weather fluctuations |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7695824/ https://www.ncbi.nlm.nih.gov/pubmed/33247164 http://dx.doi.org/10.1038/s41598-020-76900-x |
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