Cargando…

Evolution of Oxidative Phosphorylation (OXPHOS) Genes Reflecting the Evolutionary and Life Histories of Fig Wasps (Hymenoptera, Chalcidoidea)

Fig wasps are a peculiar group of insects which, for millions of years, have inhabited the enclosed syconia of fig trees. Considering the relatively closed and dark environment of fig syconia, we hypothesize that the fig wasps’ oxidative phosphorylation (OXPHOS) pathway, which is the main oxygen con...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhou, Yi, Huang, Dawei, Xin, Zhaozhe, Xiao, Jinhua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7697784/
https://www.ncbi.nlm.nih.gov/pubmed/33203150
http://dx.doi.org/10.3390/genes11111353
_version_ 1783615677872996352
author Zhou, Yi
Huang, Dawei
Xin, Zhaozhe
Xiao, Jinhua
author_facet Zhou, Yi
Huang, Dawei
Xin, Zhaozhe
Xiao, Jinhua
author_sort Zhou, Yi
collection PubMed
description Fig wasps are a peculiar group of insects which, for millions of years, have inhabited the enclosed syconia of fig trees. Considering the relatively closed and dark environment of fig syconia, we hypothesize that the fig wasps’ oxidative phosphorylation (OXPHOS) pathway, which is the main oxygen consumption and adenosine triphosphate (ATP) production system, may have adaptively evolved. In this study, we manually annotated the OXPHOS genes of 11 species of fig wasps, and compared the evolutionary patterns of OXPHOS genes for six pollinators and five non-pollinators. Thirteen mitochondrial protein-coding genes and 30 nuclear-coding single-copy orthologous genes were used to analyze the amino acid substitution rate and natural selection. The results showed high amino acid substitution rates of both mitochondrial and nuclear OXPHOS genes in fig wasps, implying the co-evolution of mitochondrial and nuclear genes. Our results further revealed that the OXPHOS-related genes evolved significantly faster in pollinators than in non-pollinators, and five genes had significant positive selection signals in the pollinator lineage, indicating that OXPHOS genes play an important role in the adaptation of pollinators. This study can help us understand the relationship between gene evolution and environmental adaptation.
format Online
Article
Text
id pubmed-7697784
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-76977842020-11-29 Evolution of Oxidative Phosphorylation (OXPHOS) Genes Reflecting the Evolutionary and Life Histories of Fig Wasps (Hymenoptera, Chalcidoidea) Zhou, Yi Huang, Dawei Xin, Zhaozhe Xiao, Jinhua Genes (Basel) Article Fig wasps are a peculiar group of insects which, for millions of years, have inhabited the enclosed syconia of fig trees. Considering the relatively closed and dark environment of fig syconia, we hypothesize that the fig wasps’ oxidative phosphorylation (OXPHOS) pathway, which is the main oxygen consumption and adenosine triphosphate (ATP) production system, may have adaptively evolved. In this study, we manually annotated the OXPHOS genes of 11 species of fig wasps, and compared the evolutionary patterns of OXPHOS genes for six pollinators and five non-pollinators. Thirteen mitochondrial protein-coding genes and 30 nuclear-coding single-copy orthologous genes were used to analyze the amino acid substitution rate and natural selection. The results showed high amino acid substitution rates of both mitochondrial and nuclear OXPHOS genes in fig wasps, implying the co-evolution of mitochondrial and nuclear genes. Our results further revealed that the OXPHOS-related genes evolved significantly faster in pollinators than in non-pollinators, and five genes had significant positive selection signals in the pollinator lineage, indicating that OXPHOS genes play an important role in the adaptation of pollinators. This study can help us understand the relationship between gene evolution and environmental adaptation. MDPI 2020-11-15 /pmc/articles/PMC7697784/ /pubmed/33203150 http://dx.doi.org/10.3390/genes11111353 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zhou, Yi
Huang, Dawei
Xin, Zhaozhe
Xiao, Jinhua
Evolution of Oxidative Phosphorylation (OXPHOS) Genes Reflecting the Evolutionary and Life Histories of Fig Wasps (Hymenoptera, Chalcidoidea)
title Evolution of Oxidative Phosphorylation (OXPHOS) Genes Reflecting the Evolutionary and Life Histories of Fig Wasps (Hymenoptera, Chalcidoidea)
title_full Evolution of Oxidative Phosphorylation (OXPHOS) Genes Reflecting the Evolutionary and Life Histories of Fig Wasps (Hymenoptera, Chalcidoidea)
title_fullStr Evolution of Oxidative Phosphorylation (OXPHOS) Genes Reflecting the Evolutionary and Life Histories of Fig Wasps (Hymenoptera, Chalcidoidea)
title_full_unstemmed Evolution of Oxidative Phosphorylation (OXPHOS) Genes Reflecting the Evolutionary and Life Histories of Fig Wasps (Hymenoptera, Chalcidoidea)
title_short Evolution of Oxidative Phosphorylation (OXPHOS) Genes Reflecting the Evolutionary and Life Histories of Fig Wasps (Hymenoptera, Chalcidoidea)
title_sort evolution of oxidative phosphorylation (oxphos) genes reflecting the evolutionary and life histories of fig wasps (hymenoptera, chalcidoidea)
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7697784/
https://www.ncbi.nlm.nih.gov/pubmed/33203150
http://dx.doi.org/10.3390/genes11111353
work_keys_str_mv AT zhouyi evolutionofoxidativephosphorylationoxphosgenesreflectingtheevolutionaryandlifehistoriesoffigwaspshymenopterachalcidoidea
AT huangdawei evolutionofoxidativephosphorylationoxphosgenesreflectingtheevolutionaryandlifehistoriesoffigwaspshymenopterachalcidoidea
AT xinzhaozhe evolutionofoxidativephosphorylationoxphosgenesreflectingtheevolutionaryandlifehistoriesoffigwaspshymenopterachalcidoidea
AT xiaojinhua evolutionofoxidativephosphorylationoxphosgenesreflectingtheevolutionaryandlifehistoriesoffigwaspshymenopterachalcidoidea