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A Deep Learning-Based Automated CT Segmentation of Prostate Cancer Anatomy for Radiation Therapy Planning-A Retrospective Multicenter Study

A commercial deep learning (DL)-based automated segmentation tool (AST) for computed tomography (CT) is evaluated for accuracy and efficiency gain within prostate cancer patients. Thirty patients from six clinics were reviewed with manual- (MC), automated- (AC) and automated and edited (AEC) contour...

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Autores principales: Kiljunen, Timo, Akram, Saad, Niemelä, Jarkko, Löyttyniemi, Eliisa, Seppälä, Jan, Heikkilä, Janne, Vuolukka, Kristiina, Kääriäinen, Okko-Sakari, Heikkilä, Vesa-Pekka, Lehtiö, Kaisa, Nikkinen, Juha, Gershkevitsh, Eduard, Borkvel, Anni, Adamson, Merve, Zolotuhhin, Daniil, Kolk, Kati, Pang, Eric Pei Ping, Tuan, Jeffrey Kit Loong, Master, Zubin, Chua, Melvin Lee Kiang, Joensuu, Timo, Kononen, Juha, Myllykangas, Mikko, Riener, Maigo, Mokka, Miia, Keyriläinen, Jani
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7697786/
https://www.ncbi.nlm.nih.gov/pubmed/33212793
http://dx.doi.org/10.3390/diagnostics10110959
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author Kiljunen, Timo
Akram, Saad
Niemelä, Jarkko
Löyttyniemi, Eliisa
Seppälä, Jan
Heikkilä, Janne
Vuolukka, Kristiina
Kääriäinen, Okko-Sakari
Heikkilä, Vesa-Pekka
Lehtiö, Kaisa
Nikkinen, Juha
Gershkevitsh, Eduard
Borkvel, Anni
Adamson, Merve
Zolotuhhin, Daniil
Kolk, Kati
Pang, Eric Pei Ping
Tuan, Jeffrey Kit Loong
Master, Zubin
Chua, Melvin Lee Kiang
Joensuu, Timo
Kononen, Juha
Myllykangas, Mikko
Riener, Maigo
Mokka, Miia
Keyriläinen, Jani
author_facet Kiljunen, Timo
Akram, Saad
Niemelä, Jarkko
Löyttyniemi, Eliisa
Seppälä, Jan
Heikkilä, Janne
Vuolukka, Kristiina
Kääriäinen, Okko-Sakari
Heikkilä, Vesa-Pekka
Lehtiö, Kaisa
Nikkinen, Juha
Gershkevitsh, Eduard
Borkvel, Anni
Adamson, Merve
Zolotuhhin, Daniil
Kolk, Kati
Pang, Eric Pei Ping
Tuan, Jeffrey Kit Loong
Master, Zubin
Chua, Melvin Lee Kiang
Joensuu, Timo
Kononen, Juha
Myllykangas, Mikko
Riener, Maigo
Mokka, Miia
Keyriläinen, Jani
author_sort Kiljunen, Timo
collection PubMed
description A commercial deep learning (DL)-based automated segmentation tool (AST) for computed tomography (CT) is evaluated for accuracy and efficiency gain within prostate cancer patients. Thirty patients from six clinics were reviewed with manual- (MC), automated- (AC) and automated and edited (AEC) contouring methods. In the AEC group, created contours (prostate, seminal vesicles, bladder, rectum, femoral heads and penile bulb) were edited, whereas the MC group included empty datasets for MC. In one clinic, lymph node CTV delineations were evaluated for interobserver variability. Compared to MC, the mean time saved using the AST was 12 min for the whole data set (46%) and 12 min for the lymph node CTV (60%), respectively. The delineation consistency between MC and AEC groups according to the Dice similarity coefficient (DSC) improved from 0.78 to 0.94 for the whole data set and from 0.76 to 0.91 for the lymph nodes. The mean DSCs between MC and AC for all six clinics were 0.82 for prostate, 0.72 for seminal vesicles, 0.93 for bladder, 0.84 for rectum, 0.69 for femoral heads and 0.51 for penile bulb. This study proves that using a general DL-based AST for CT images saves time and improves consistency.
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spelling pubmed-76977862020-11-29 A Deep Learning-Based Automated CT Segmentation of Prostate Cancer Anatomy for Radiation Therapy Planning-A Retrospective Multicenter Study Kiljunen, Timo Akram, Saad Niemelä, Jarkko Löyttyniemi, Eliisa Seppälä, Jan Heikkilä, Janne Vuolukka, Kristiina Kääriäinen, Okko-Sakari Heikkilä, Vesa-Pekka Lehtiö, Kaisa Nikkinen, Juha Gershkevitsh, Eduard Borkvel, Anni Adamson, Merve Zolotuhhin, Daniil Kolk, Kati Pang, Eric Pei Ping Tuan, Jeffrey Kit Loong Master, Zubin Chua, Melvin Lee Kiang Joensuu, Timo Kononen, Juha Myllykangas, Mikko Riener, Maigo Mokka, Miia Keyriläinen, Jani Diagnostics (Basel) Article A commercial deep learning (DL)-based automated segmentation tool (AST) for computed tomography (CT) is evaluated for accuracy and efficiency gain within prostate cancer patients. Thirty patients from six clinics were reviewed with manual- (MC), automated- (AC) and automated and edited (AEC) contouring methods. In the AEC group, created contours (prostate, seminal vesicles, bladder, rectum, femoral heads and penile bulb) were edited, whereas the MC group included empty datasets for MC. In one clinic, lymph node CTV delineations were evaluated for interobserver variability. Compared to MC, the mean time saved using the AST was 12 min for the whole data set (46%) and 12 min for the lymph node CTV (60%), respectively. The delineation consistency between MC and AEC groups according to the Dice similarity coefficient (DSC) improved from 0.78 to 0.94 for the whole data set and from 0.76 to 0.91 for the lymph nodes. The mean DSCs between MC and AC for all six clinics were 0.82 for prostate, 0.72 for seminal vesicles, 0.93 for bladder, 0.84 for rectum, 0.69 for femoral heads and 0.51 for penile bulb. This study proves that using a general DL-based AST for CT images saves time and improves consistency. MDPI 2020-11-17 /pmc/articles/PMC7697786/ /pubmed/33212793 http://dx.doi.org/10.3390/diagnostics10110959 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Kiljunen, Timo
Akram, Saad
Niemelä, Jarkko
Löyttyniemi, Eliisa
Seppälä, Jan
Heikkilä, Janne
Vuolukka, Kristiina
Kääriäinen, Okko-Sakari
Heikkilä, Vesa-Pekka
Lehtiö, Kaisa
Nikkinen, Juha
Gershkevitsh, Eduard
Borkvel, Anni
Adamson, Merve
Zolotuhhin, Daniil
Kolk, Kati
Pang, Eric Pei Ping
Tuan, Jeffrey Kit Loong
Master, Zubin
Chua, Melvin Lee Kiang
Joensuu, Timo
Kononen, Juha
Myllykangas, Mikko
Riener, Maigo
Mokka, Miia
Keyriläinen, Jani
A Deep Learning-Based Automated CT Segmentation of Prostate Cancer Anatomy for Radiation Therapy Planning-A Retrospective Multicenter Study
title A Deep Learning-Based Automated CT Segmentation of Prostate Cancer Anatomy for Radiation Therapy Planning-A Retrospective Multicenter Study
title_full A Deep Learning-Based Automated CT Segmentation of Prostate Cancer Anatomy for Radiation Therapy Planning-A Retrospective Multicenter Study
title_fullStr A Deep Learning-Based Automated CT Segmentation of Prostate Cancer Anatomy for Radiation Therapy Planning-A Retrospective Multicenter Study
title_full_unstemmed A Deep Learning-Based Automated CT Segmentation of Prostate Cancer Anatomy for Radiation Therapy Planning-A Retrospective Multicenter Study
title_short A Deep Learning-Based Automated CT Segmentation of Prostate Cancer Anatomy for Radiation Therapy Planning-A Retrospective Multicenter Study
title_sort deep learning-based automated ct segmentation of prostate cancer anatomy for radiation therapy planning-a retrospective multicenter study
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7697786/
https://www.ncbi.nlm.nih.gov/pubmed/33212793
http://dx.doi.org/10.3390/diagnostics10110959
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