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A Deep Learning-Based Automated CT Segmentation of Prostate Cancer Anatomy for Radiation Therapy Planning-A Retrospective Multicenter Study
A commercial deep learning (DL)-based automated segmentation tool (AST) for computed tomography (CT) is evaluated for accuracy and efficiency gain within prostate cancer patients. Thirty patients from six clinics were reviewed with manual- (MC), automated- (AC) and automated and edited (AEC) contour...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7697786/ https://www.ncbi.nlm.nih.gov/pubmed/33212793 http://dx.doi.org/10.3390/diagnostics10110959 |
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author | Kiljunen, Timo Akram, Saad Niemelä, Jarkko Löyttyniemi, Eliisa Seppälä, Jan Heikkilä, Janne Vuolukka, Kristiina Kääriäinen, Okko-Sakari Heikkilä, Vesa-Pekka Lehtiö, Kaisa Nikkinen, Juha Gershkevitsh, Eduard Borkvel, Anni Adamson, Merve Zolotuhhin, Daniil Kolk, Kati Pang, Eric Pei Ping Tuan, Jeffrey Kit Loong Master, Zubin Chua, Melvin Lee Kiang Joensuu, Timo Kononen, Juha Myllykangas, Mikko Riener, Maigo Mokka, Miia Keyriläinen, Jani |
author_facet | Kiljunen, Timo Akram, Saad Niemelä, Jarkko Löyttyniemi, Eliisa Seppälä, Jan Heikkilä, Janne Vuolukka, Kristiina Kääriäinen, Okko-Sakari Heikkilä, Vesa-Pekka Lehtiö, Kaisa Nikkinen, Juha Gershkevitsh, Eduard Borkvel, Anni Adamson, Merve Zolotuhhin, Daniil Kolk, Kati Pang, Eric Pei Ping Tuan, Jeffrey Kit Loong Master, Zubin Chua, Melvin Lee Kiang Joensuu, Timo Kononen, Juha Myllykangas, Mikko Riener, Maigo Mokka, Miia Keyriläinen, Jani |
author_sort | Kiljunen, Timo |
collection | PubMed |
description | A commercial deep learning (DL)-based automated segmentation tool (AST) for computed tomography (CT) is evaluated for accuracy and efficiency gain within prostate cancer patients. Thirty patients from six clinics were reviewed with manual- (MC), automated- (AC) and automated and edited (AEC) contouring methods. In the AEC group, created contours (prostate, seminal vesicles, bladder, rectum, femoral heads and penile bulb) were edited, whereas the MC group included empty datasets for MC. In one clinic, lymph node CTV delineations were evaluated for interobserver variability. Compared to MC, the mean time saved using the AST was 12 min for the whole data set (46%) and 12 min for the lymph node CTV (60%), respectively. The delineation consistency between MC and AEC groups according to the Dice similarity coefficient (DSC) improved from 0.78 to 0.94 for the whole data set and from 0.76 to 0.91 for the lymph nodes. The mean DSCs between MC and AC for all six clinics were 0.82 for prostate, 0.72 for seminal vesicles, 0.93 for bladder, 0.84 for rectum, 0.69 for femoral heads and 0.51 for penile bulb. This study proves that using a general DL-based AST for CT images saves time and improves consistency. |
format | Online Article Text |
id | pubmed-7697786 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-76977862020-11-29 A Deep Learning-Based Automated CT Segmentation of Prostate Cancer Anatomy for Radiation Therapy Planning-A Retrospective Multicenter Study Kiljunen, Timo Akram, Saad Niemelä, Jarkko Löyttyniemi, Eliisa Seppälä, Jan Heikkilä, Janne Vuolukka, Kristiina Kääriäinen, Okko-Sakari Heikkilä, Vesa-Pekka Lehtiö, Kaisa Nikkinen, Juha Gershkevitsh, Eduard Borkvel, Anni Adamson, Merve Zolotuhhin, Daniil Kolk, Kati Pang, Eric Pei Ping Tuan, Jeffrey Kit Loong Master, Zubin Chua, Melvin Lee Kiang Joensuu, Timo Kononen, Juha Myllykangas, Mikko Riener, Maigo Mokka, Miia Keyriläinen, Jani Diagnostics (Basel) Article A commercial deep learning (DL)-based automated segmentation tool (AST) for computed tomography (CT) is evaluated for accuracy and efficiency gain within prostate cancer patients. Thirty patients from six clinics were reviewed with manual- (MC), automated- (AC) and automated and edited (AEC) contouring methods. In the AEC group, created contours (prostate, seminal vesicles, bladder, rectum, femoral heads and penile bulb) were edited, whereas the MC group included empty datasets for MC. In one clinic, lymph node CTV delineations were evaluated for interobserver variability. Compared to MC, the mean time saved using the AST was 12 min for the whole data set (46%) and 12 min for the lymph node CTV (60%), respectively. The delineation consistency between MC and AEC groups according to the Dice similarity coefficient (DSC) improved from 0.78 to 0.94 for the whole data set and from 0.76 to 0.91 for the lymph nodes. The mean DSCs between MC and AC for all six clinics were 0.82 for prostate, 0.72 for seminal vesicles, 0.93 for bladder, 0.84 for rectum, 0.69 for femoral heads and 0.51 for penile bulb. This study proves that using a general DL-based AST for CT images saves time and improves consistency. MDPI 2020-11-17 /pmc/articles/PMC7697786/ /pubmed/33212793 http://dx.doi.org/10.3390/diagnostics10110959 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Kiljunen, Timo Akram, Saad Niemelä, Jarkko Löyttyniemi, Eliisa Seppälä, Jan Heikkilä, Janne Vuolukka, Kristiina Kääriäinen, Okko-Sakari Heikkilä, Vesa-Pekka Lehtiö, Kaisa Nikkinen, Juha Gershkevitsh, Eduard Borkvel, Anni Adamson, Merve Zolotuhhin, Daniil Kolk, Kati Pang, Eric Pei Ping Tuan, Jeffrey Kit Loong Master, Zubin Chua, Melvin Lee Kiang Joensuu, Timo Kononen, Juha Myllykangas, Mikko Riener, Maigo Mokka, Miia Keyriläinen, Jani A Deep Learning-Based Automated CT Segmentation of Prostate Cancer Anatomy for Radiation Therapy Planning-A Retrospective Multicenter Study |
title | A Deep Learning-Based Automated CT Segmentation of Prostate Cancer Anatomy for Radiation Therapy Planning-A Retrospective Multicenter Study |
title_full | A Deep Learning-Based Automated CT Segmentation of Prostate Cancer Anatomy for Radiation Therapy Planning-A Retrospective Multicenter Study |
title_fullStr | A Deep Learning-Based Automated CT Segmentation of Prostate Cancer Anatomy for Radiation Therapy Planning-A Retrospective Multicenter Study |
title_full_unstemmed | A Deep Learning-Based Automated CT Segmentation of Prostate Cancer Anatomy for Radiation Therapy Planning-A Retrospective Multicenter Study |
title_short | A Deep Learning-Based Automated CT Segmentation of Prostate Cancer Anatomy for Radiation Therapy Planning-A Retrospective Multicenter Study |
title_sort | deep learning-based automated ct segmentation of prostate cancer anatomy for radiation therapy planning-a retrospective multicenter study |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7697786/ https://www.ncbi.nlm.nih.gov/pubmed/33212793 http://dx.doi.org/10.3390/diagnostics10110959 |
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