Cargando…
Genetically Encoded Biosensor-Based Screening for Directed Bacteriophage T4 Lysozyme Evolution
Lysozyme is widely used as a model protein in studies of structure–function relationships. Recently, lysozyme has gained attention for use in accelerating the degradation of secondary sludge, which mainly consists of bacteria. However, a high-throughput screening system for lysozyme engineering has...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7698408/ https://www.ncbi.nlm.nih.gov/pubmed/33212940 http://dx.doi.org/10.3390/ijms21228668 |
_version_ | 1783615823696363520 |
---|---|
author | Woo, Seung-Gyun Kim, Seong Keun Oh, Baek-Rock Lee, Seung-Goo Lee, Dae-Hee |
author_facet | Woo, Seung-Gyun Kim, Seong Keun Oh, Baek-Rock Lee, Seung-Goo Lee, Dae-Hee |
author_sort | Woo, Seung-Gyun |
collection | PubMed |
description | Lysozyme is widely used as a model protein in studies of structure–function relationships. Recently, lysozyme has gained attention for use in accelerating the degradation of secondary sludge, which mainly consists of bacteria. However, a high-throughput screening system for lysozyme engineering has not been reported. Here, we present a lysozyme screening system using a genetically encoded biosensor. We first cloned bacteriophage T4 lysozyme (T4L) into a plasmid under control of the araBAD promoter. The plasmid was expressed in Escherichia coli with no toxic effects on growth. Next, we observed that increased soluble T4L expression decreased the fluorescence produced by the genetic enzyme screening system. To investigate T4L evolution based on this finding, we generated a T4L random mutation library, which was screened using the genetic enzyme screening system. Finally, we identified two T4L variants showing 1.4-fold enhanced lytic activity compared to native T4L. To our knowledge, this is the first report describing the use of a genetically encoded biosensor to investigate bacteriophage T4L evolution. Our approach can be used to investigate the evolution of other lysozymes, which will expand the applications of lysozyme. |
format | Online Article Text |
id | pubmed-7698408 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-76984082020-11-29 Genetically Encoded Biosensor-Based Screening for Directed Bacteriophage T4 Lysozyme Evolution Woo, Seung-Gyun Kim, Seong Keun Oh, Baek-Rock Lee, Seung-Goo Lee, Dae-Hee Int J Mol Sci Article Lysozyme is widely used as a model protein in studies of structure–function relationships. Recently, lysozyme has gained attention for use in accelerating the degradation of secondary sludge, which mainly consists of bacteria. However, a high-throughput screening system for lysozyme engineering has not been reported. Here, we present a lysozyme screening system using a genetically encoded biosensor. We first cloned bacteriophage T4 lysozyme (T4L) into a plasmid under control of the araBAD promoter. The plasmid was expressed in Escherichia coli with no toxic effects on growth. Next, we observed that increased soluble T4L expression decreased the fluorescence produced by the genetic enzyme screening system. To investigate T4L evolution based on this finding, we generated a T4L random mutation library, which was screened using the genetic enzyme screening system. Finally, we identified two T4L variants showing 1.4-fold enhanced lytic activity compared to native T4L. To our knowledge, this is the first report describing the use of a genetically encoded biosensor to investigate bacteriophage T4L evolution. Our approach can be used to investigate the evolution of other lysozymes, which will expand the applications of lysozyme. MDPI 2020-11-17 /pmc/articles/PMC7698408/ /pubmed/33212940 http://dx.doi.org/10.3390/ijms21228668 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Woo, Seung-Gyun Kim, Seong Keun Oh, Baek-Rock Lee, Seung-Goo Lee, Dae-Hee Genetically Encoded Biosensor-Based Screening for Directed Bacteriophage T4 Lysozyme Evolution |
title | Genetically Encoded Biosensor-Based Screening for Directed Bacteriophage T4 Lysozyme Evolution |
title_full | Genetically Encoded Biosensor-Based Screening for Directed Bacteriophage T4 Lysozyme Evolution |
title_fullStr | Genetically Encoded Biosensor-Based Screening for Directed Bacteriophage T4 Lysozyme Evolution |
title_full_unstemmed | Genetically Encoded Biosensor-Based Screening for Directed Bacteriophage T4 Lysozyme Evolution |
title_short | Genetically Encoded Biosensor-Based Screening for Directed Bacteriophage T4 Lysozyme Evolution |
title_sort | genetically encoded biosensor-based screening for directed bacteriophage t4 lysozyme evolution |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7698408/ https://www.ncbi.nlm.nih.gov/pubmed/33212940 http://dx.doi.org/10.3390/ijms21228668 |
work_keys_str_mv | AT wooseunggyun geneticallyencodedbiosensorbasedscreeningfordirectedbacteriophaget4lysozymeevolution AT kimseongkeun geneticallyencodedbiosensorbasedscreeningfordirectedbacteriophaget4lysozymeevolution AT ohbaekrock geneticallyencodedbiosensorbasedscreeningfordirectedbacteriophaget4lysozymeevolution AT leeseunggoo geneticallyencodedbiosensorbasedscreeningfordirectedbacteriophaget4lysozymeevolution AT leedaehee geneticallyencodedbiosensorbasedscreeningfordirectedbacteriophaget4lysozymeevolution |