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Genetically Encoded Biosensor-Based Screening for Directed Bacteriophage T4 Lysozyme Evolution

Lysozyme is widely used as a model protein in studies of structure–function relationships. Recently, lysozyme has gained attention for use in accelerating the degradation of secondary sludge, which mainly consists of bacteria. However, a high-throughput screening system for lysozyme engineering has...

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Autores principales: Woo, Seung-Gyun, Kim, Seong Keun, Oh, Baek-Rock, Lee, Seung-Goo, Lee, Dae-Hee
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7698408/
https://www.ncbi.nlm.nih.gov/pubmed/33212940
http://dx.doi.org/10.3390/ijms21228668
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author Woo, Seung-Gyun
Kim, Seong Keun
Oh, Baek-Rock
Lee, Seung-Goo
Lee, Dae-Hee
author_facet Woo, Seung-Gyun
Kim, Seong Keun
Oh, Baek-Rock
Lee, Seung-Goo
Lee, Dae-Hee
author_sort Woo, Seung-Gyun
collection PubMed
description Lysozyme is widely used as a model protein in studies of structure–function relationships. Recently, lysozyme has gained attention for use in accelerating the degradation of secondary sludge, which mainly consists of bacteria. However, a high-throughput screening system for lysozyme engineering has not been reported. Here, we present a lysozyme screening system using a genetically encoded biosensor. We first cloned bacteriophage T4 lysozyme (T4L) into a plasmid under control of the araBAD promoter. The plasmid was expressed in Escherichia coli with no toxic effects on growth. Next, we observed that increased soluble T4L expression decreased the fluorescence produced by the genetic enzyme screening system. To investigate T4L evolution based on this finding, we generated a T4L random mutation library, which was screened using the genetic enzyme screening system. Finally, we identified two T4L variants showing 1.4-fold enhanced lytic activity compared to native T4L. To our knowledge, this is the first report describing the use of a genetically encoded biosensor to investigate bacteriophage T4L evolution. Our approach can be used to investigate the evolution of other lysozymes, which will expand the applications of lysozyme.
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spelling pubmed-76984082020-11-29 Genetically Encoded Biosensor-Based Screening for Directed Bacteriophage T4 Lysozyme Evolution Woo, Seung-Gyun Kim, Seong Keun Oh, Baek-Rock Lee, Seung-Goo Lee, Dae-Hee Int J Mol Sci Article Lysozyme is widely used as a model protein in studies of structure–function relationships. Recently, lysozyme has gained attention for use in accelerating the degradation of secondary sludge, which mainly consists of bacteria. However, a high-throughput screening system for lysozyme engineering has not been reported. Here, we present a lysozyme screening system using a genetically encoded biosensor. We first cloned bacteriophage T4 lysozyme (T4L) into a plasmid under control of the araBAD promoter. The plasmid was expressed in Escherichia coli with no toxic effects on growth. Next, we observed that increased soluble T4L expression decreased the fluorescence produced by the genetic enzyme screening system. To investigate T4L evolution based on this finding, we generated a T4L random mutation library, which was screened using the genetic enzyme screening system. Finally, we identified two T4L variants showing 1.4-fold enhanced lytic activity compared to native T4L. To our knowledge, this is the first report describing the use of a genetically encoded biosensor to investigate bacteriophage T4L evolution. Our approach can be used to investigate the evolution of other lysozymes, which will expand the applications of lysozyme. MDPI 2020-11-17 /pmc/articles/PMC7698408/ /pubmed/33212940 http://dx.doi.org/10.3390/ijms21228668 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Woo, Seung-Gyun
Kim, Seong Keun
Oh, Baek-Rock
Lee, Seung-Goo
Lee, Dae-Hee
Genetically Encoded Biosensor-Based Screening for Directed Bacteriophage T4 Lysozyme Evolution
title Genetically Encoded Biosensor-Based Screening for Directed Bacteriophage T4 Lysozyme Evolution
title_full Genetically Encoded Biosensor-Based Screening for Directed Bacteriophage T4 Lysozyme Evolution
title_fullStr Genetically Encoded Biosensor-Based Screening for Directed Bacteriophage T4 Lysozyme Evolution
title_full_unstemmed Genetically Encoded Biosensor-Based Screening for Directed Bacteriophage T4 Lysozyme Evolution
title_short Genetically Encoded Biosensor-Based Screening for Directed Bacteriophage T4 Lysozyme Evolution
title_sort genetically encoded biosensor-based screening for directed bacteriophage t4 lysozyme evolution
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7698408/
https://www.ncbi.nlm.nih.gov/pubmed/33212940
http://dx.doi.org/10.3390/ijms21228668
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