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Development and validation of a three-long noncoding RNA signature for predicting prognosis of patients with gastric cancer
BACKGROUND: Gastric cancer (GC) is one of the most frequently diagnosed gastrointestinal cancers throughout the world. Novel prognostic biomarkers are required to predict the prognosis of GC. AIM: To identify a multi-long noncoding RNA (lncRNA) prognostic model for GC. METHODS: Transcriptome data an...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Baishideng Publishing Group Inc
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7701940/ https://www.ncbi.nlm.nih.gov/pubmed/33311941 http://dx.doi.org/10.3748/wjg.v26.i44.6929 |
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author | Zhang, Jun Piao, Hai-Yan Wang, Yue Lou, Mei-Yue Guo, Shuai Zhao, Yan |
author_facet | Zhang, Jun Piao, Hai-Yan Wang, Yue Lou, Mei-Yue Guo, Shuai Zhao, Yan |
author_sort | Zhang, Jun |
collection | PubMed |
description | BACKGROUND: Gastric cancer (GC) is one of the most frequently diagnosed gastrointestinal cancers throughout the world. Novel prognostic biomarkers are required to predict the prognosis of GC. AIM: To identify a multi-long noncoding RNA (lncRNA) prognostic model for GC. METHODS: Transcriptome data and clinical data were downloaded from The Cancer Genome Atlas. COX and least absolute shrinkage and selection operator regression analyses were performed to screen for prognosis associated lncRNAs. Receiver operating characteristic curve and Kaplan-Meier survival analyses were applied to evaluate the effectiveness of the model. RESULTS: The prediction model was established based on the expression of AC007991.4, AC079385.3, and AL109615.2 Based on the model, GC patients were divided into “high risk” and “low risk” groups to compare the differences in survival. The model was re-evaluated with the clinical data of our center. CONCLUSION: The 3-lncRNA combination model is an independent prognostic factor for GC. |
format | Online Article Text |
id | pubmed-7701940 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Baishideng Publishing Group Inc |
record_format | MEDLINE/PubMed |
spelling | pubmed-77019402020-12-10 Development and validation of a three-long noncoding RNA signature for predicting prognosis of patients with gastric cancer Zhang, Jun Piao, Hai-Yan Wang, Yue Lou, Mei-Yue Guo, Shuai Zhao, Yan World J Gastroenterol Basic Study BACKGROUND: Gastric cancer (GC) is one of the most frequently diagnosed gastrointestinal cancers throughout the world. Novel prognostic biomarkers are required to predict the prognosis of GC. AIM: To identify a multi-long noncoding RNA (lncRNA) prognostic model for GC. METHODS: Transcriptome data and clinical data were downloaded from The Cancer Genome Atlas. COX and least absolute shrinkage and selection operator regression analyses were performed to screen for prognosis associated lncRNAs. Receiver operating characteristic curve and Kaplan-Meier survival analyses were applied to evaluate the effectiveness of the model. RESULTS: The prediction model was established based on the expression of AC007991.4, AC079385.3, and AL109615.2 Based on the model, GC patients were divided into “high risk” and “low risk” groups to compare the differences in survival. The model was re-evaluated with the clinical data of our center. CONCLUSION: The 3-lncRNA combination model is an independent prognostic factor for GC. Baishideng Publishing Group Inc 2020-11-28 2020-11-28 /pmc/articles/PMC7701940/ /pubmed/33311941 http://dx.doi.org/10.3748/wjg.v26.i44.6929 Text en ©The Author(s) 2020. Published by Baishideng Publishing Group Inc. All rights reserved. http://creativecommons.org/licenses/by-nc/4.0/ This article is an open-access article which was selected by an in-house editor and fully peer-reviewed by external reviewers. It is distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited and the use is non-commercial. |
spellingShingle | Basic Study Zhang, Jun Piao, Hai-Yan Wang, Yue Lou, Mei-Yue Guo, Shuai Zhao, Yan Development and validation of a three-long noncoding RNA signature for predicting prognosis of patients with gastric cancer |
title | Development and validation of a three-long noncoding RNA signature for predicting prognosis of patients with gastric cancer |
title_full | Development and validation of a three-long noncoding RNA signature for predicting prognosis of patients with gastric cancer |
title_fullStr | Development and validation of a three-long noncoding RNA signature for predicting prognosis of patients with gastric cancer |
title_full_unstemmed | Development and validation of a three-long noncoding RNA signature for predicting prognosis of patients with gastric cancer |
title_short | Development and validation of a three-long noncoding RNA signature for predicting prognosis of patients with gastric cancer |
title_sort | development and validation of a three-long noncoding rna signature for predicting prognosis of patients with gastric cancer |
topic | Basic Study |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7701940/ https://www.ncbi.nlm.nih.gov/pubmed/33311941 http://dx.doi.org/10.3748/wjg.v26.i44.6929 |
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