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Development and validation of a three-long noncoding RNA signature for predicting prognosis of patients with gastric cancer

BACKGROUND: Gastric cancer (GC) is one of the most frequently diagnosed gastrointestinal cancers throughout the world. Novel prognostic biomarkers are required to predict the prognosis of GC. AIM: To identify a multi-long noncoding RNA (lncRNA) prognostic model for GC. METHODS: Transcriptome data an...

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Autores principales: Zhang, Jun, Piao, Hai-Yan, Wang, Yue, Lou, Mei-Yue, Guo, Shuai, Zhao, Yan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Baishideng Publishing Group Inc 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7701940/
https://www.ncbi.nlm.nih.gov/pubmed/33311941
http://dx.doi.org/10.3748/wjg.v26.i44.6929
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author Zhang, Jun
Piao, Hai-Yan
Wang, Yue
Lou, Mei-Yue
Guo, Shuai
Zhao, Yan
author_facet Zhang, Jun
Piao, Hai-Yan
Wang, Yue
Lou, Mei-Yue
Guo, Shuai
Zhao, Yan
author_sort Zhang, Jun
collection PubMed
description BACKGROUND: Gastric cancer (GC) is one of the most frequently diagnosed gastrointestinal cancers throughout the world. Novel prognostic biomarkers are required to predict the prognosis of GC. AIM: To identify a multi-long noncoding RNA (lncRNA) prognostic model for GC. METHODS: Transcriptome data and clinical data were downloaded from The Cancer Genome Atlas. COX and least absolute shrinkage and selection operator regression analyses were performed to screen for prognosis associated lncRNAs. Receiver operating characteristic curve and Kaplan-Meier survival analyses were applied to evaluate the effectiveness of the model. RESULTS: The prediction model was established based on the expression of AC007991.4, AC079385.3, and AL109615.2 Based on the model, GC patients were divided into “high risk” and “low risk” groups to compare the differences in survival. The model was re-evaluated with the clinical data of our center. CONCLUSION: The 3-lncRNA combination model is an independent prognostic factor for GC.
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spelling pubmed-77019402020-12-10 Development and validation of a three-long noncoding RNA signature for predicting prognosis of patients with gastric cancer Zhang, Jun Piao, Hai-Yan Wang, Yue Lou, Mei-Yue Guo, Shuai Zhao, Yan World J Gastroenterol Basic Study BACKGROUND: Gastric cancer (GC) is one of the most frequently diagnosed gastrointestinal cancers throughout the world. Novel prognostic biomarkers are required to predict the prognosis of GC. AIM: To identify a multi-long noncoding RNA (lncRNA) prognostic model for GC. METHODS: Transcriptome data and clinical data were downloaded from The Cancer Genome Atlas. COX and least absolute shrinkage and selection operator regression analyses were performed to screen for prognosis associated lncRNAs. Receiver operating characteristic curve and Kaplan-Meier survival analyses were applied to evaluate the effectiveness of the model. RESULTS: The prediction model was established based on the expression of AC007991.4, AC079385.3, and AL109615.2 Based on the model, GC patients were divided into “high risk” and “low risk” groups to compare the differences in survival. The model was re-evaluated with the clinical data of our center. CONCLUSION: The 3-lncRNA combination model is an independent prognostic factor for GC. Baishideng Publishing Group Inc 2020-11-28 2020-11-28 /pmc/articles/PMC7701940/ /pubmed/33311941 http://dx.doi.org/10.3748/wjg.v26.i44.6929 Text en ©The Author(s) 2020. Published by Baishideng Publishing Group Inc. All rights reserved. http://creativecommons.org/licenses/by-nc/4.0/ This article is an open-access article which was selected by an in-house editor and fully peer-reviewed by external reviewers. It is distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited and the use is non-commercial.
spellingShingle Basic Study
Zhang, Jun
Piao, Hai-Yan
Wang, Yue
Lou, Mei-Yue
Guo, Shuai
Zhao, Yan
Development and validation of a three-long noncoding RNA signature for predicting prognosis of patients with gastric cancer
title Development and validation of a three-long noncoding RNA signature for predicting prognosis of patients with gastric cancer
title_full Development and validation of a three-long noncoding RNA signature for predicting prognosis of patients with gastric cancer
title_fullStr Development and validation of a three-long noncoding RNA signature for predicting prognosis of patients with gastric cancer
title_full_unstemmed Development and validation of a three-long noncoding RNA signature for predicting prognosis of patients with gastric cancer
title_short Development and validation of a three-long noncoding RNA signature for predicting prognosis of patients with gastric cancer
title_sort development and validation of a three-long noncoding rna signature for predicting prognosis of patients with gastric cancer
topic Basic Study
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7701940/
https://www.ncbi.nlm.nih.gov/pubmed/33311941
http://dx.doi.org/10.3748/wjg.v26.i44.6929
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