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Data quantity is more important than its spatial bias for predictive species distribution modelling
Biological records are often the data of choice for training predictive species distribution models (SDMs), but spatial sampling bias is pervasive in biological records data at multiple spatial scales and is thought to impair the performance of SDMs. We simulated presences and absences of virtual sp...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7703440/ https://www.ncbi.nlm.nih.gov/pubmed/33312769 http://dx.doi.org/10.7717/peerj.10411 |
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author | Gaul, Willson Sadykova, Dinara White, Hannah J. Leon-Sanchez, Lupe Caplat, Paul Emmerson, Mark C. Yearsley, Jon M. |
author_facet | Gaul, Willson Sadykova, Dinara White, Hannah J. Leon-Sanchez, Lupe Caplat, Paul Emmerson, Mark C. Yearsley, Jon M. |
author_sort | Gaul, Willson |
collection | PubMed |
description | Biological records are often the data of choice for training predictive species distribution models (SDMs), but spatial sampling bias is pervasive in biological records data at multiple spatial scales and is thought to impair the performance of SDMs. We simulated presences and absences of virtual species as well as the process of recording these species to evaluate the effect on species distribution model prediction performance of (1) spatial bias in training data, (2) sample size (the average number of observations per species), and (3) the choice of species distribution modelling method. Our approach is novel in quantifying and applying real-world spatial sampling biases to simulated data. Spatial bias in training data decreased species distribution model prediction performance, but sample size and the choice of modelling method were more important than spatial bias in determining the prediction performance of species distribution models. |
format | Online Article Text |
id | pubmed-7703440 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-77034402020-12-10 Data quantity is more important than its spatial bias for predictive species distribution modelling Gaul, Willson Sadykova, Dinara White, Hannah J. Leon-Sanchez, Lupe Caplat, Paul Emmerson, Mark C. Yearsley, Jon M. PeerJ Biogeography Biological records are often the data of choice for training predictive species distribution models (SDMs), but spatial sampling bias is pervasive in biological records data at multiple spatial scales and is thought to impair the performance of SDMs. We simulated presences and absences of virtual species as well as the process of recording these species to evaluate the effect on species distribution model prediction performance of (1) spatial bias in training data, (2) sample size (the average number of observations per species), and (3) the choice of species distribution modelling method. Our approach is novel in quantifying and applying real-world spatial sampling biases to simulated data. Spatial bias in training data decreased species distribution model prediction performance, but sample size and the choice of modelling method were more important than spatial bias in determining the prediction performance of species distribution models. PeerJ Inc. 2020-11-27 /pmc/articles/PMC7703440/ /pubmed/33312769 http://dx.doi.org/10.7717/peerj.10411 Text en ©2020 Gaul et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Biogeography Gaul, Willson Sadykova, Dinara White, Hannah J. Leon-Sanchez, Lupe Caplat, Paul Emmerson, Mark C. Yearsley, Jon M. Data quantity is more important than its spatial bias for predictive species distribution modelling |
title | Data quantity is more important than its spatial bias for predictive species distribution modelling |
title_full | Data quantity is more important than its spatial bias for predictive species distribution modelling |
title_fullStr | Data quantity is more important than its spatial bias for predictive species distribution modelling |
title_full_unstemmed | Data quantity is more important than its spatial bias for predictive species distribution modelling |
title_short | Data quantity is more important than its spatial bias for predictive species distribution modelling |
title_sort | data quantity is more important than its spatial bias for predictive species distribution modelling |
topic | Biogeography |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7703440/ https://www.ncbi.nlm.nih.gov/pubmed/33312769 http://dx.doi.org/10.7717/peerj.10411 |
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