Cargando…
Strategy for identification of cis-dihydrodiendiol-degrading dehydrogenases in E. coli BW25113
cis-Dihydrodiendiols are valuable compounds, finding multiple application as chiral synthons in organic chemistry. The biotechnological route for the generation of cis-dihydrodiendiols involves the dihydroxylation of aromatic compounds, catalyzed by Rieske non-heme iron dioxygenases. To date, numero...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7704418/ https://www.ncbi.nlm.nih.gov/pubmed/33299804 http://dx.doi.org/10.1016/j.mex.2020.101143 |
_version_ | 1783616813821591552 |
---|---|
author | Wissner, Julian L. Ludwig, Julian Escobedo-Hinojosa, Wendy Hauer, Bernhard |
author_facet | Wissner, Julian L. Ludwig, Julian Escobedo-Hinojosa, Wendy Hauer, Bernhard |
author_sort | Wissner, Julian L. |
collection | PubMed |
description | cis-Dihydrodiendiols are valuable compounds, finding multiple application as chiral synthons in organic chemistry. The biotechnological route for the generation of cis-dihydrodiendiols involves the dihydroxylation of aromatic compounds, catalyzed by Rieske non-heme iron dioxygenases. To date, numerous examples of recombinant E. coli, harboring such dioxygenases, can be found in the literature. Nevertheless, there is only a minor number of publications, addressing the E. coli catalyzed degradation of cis-dihydrodiendiols into catechols via dehydrogenases. Identification and elimination of such dehydrogenase catalyzed degradation is key for the establishment of enhanced recombinant E. coli platforms pursuing the production of cis-dihydrodiendiols. Here, we provide a fast and easy strategy for the identification of promiscuous alcohol dehydrogenases in E. coli BW25113, catalyzing the degradation of cis-dihydrodiendiols into catechols. This approach is based on the screening of dehydrogenase deficient KEIO strains, regarding their incapability of degrading a cis-dihydrodiendiol of choice. • Novel screening strategy for E. coli BW25113 dehydrogenase knock-outs, incapable of degrading cis-dihydrodiendiols was validated for cis-1,2-dihydrocatechol as substrate; • Corresponding knock-outs can be used for recombinant production of cis-dihydrodiendiols; • Simple analysis based on liquid chromatography with diode array detector (HPLC-DAD). |
format | Online Article Text |
id | pubmed-7704418 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-77044182020-12-08 Strategy for identification of cis-dihydrodiendiol-degrading dehydrogenases in E. coli BW25113 Wissner, Julian L. Ludwig, Julian Escobedo-Hinojosa, Wendy Hauer, Bernhard MethodsX Method Article cis-Dihydrodiendiols are valuable compounds, finding multiple application as chiral synthons in organic chemistry. The biotechnological route for the generation of cis-dihydrodiendiols involves the dihydroxylation of aromatic compounds, catalyzed by Rieske non-heme iron dioxygenases. To date, numerous examples of recombinant E. coli, harboring such dioxygenases, can be found in the literature. Nevertheless, there is only a minor number of publications, addressing the E. coli catalyzed degradation of cis-dihydrodiendiols into catechols via dehydrogenases. Identification and elimination of such dehydrogenase catalyzed degradation is key for the establishment of enhanced recombinant E. coli platforms pursuing the production of cis-dihydrodiendiols. Here, we provide a fast and easy strategy for the identification of promiscuous alcohol dehydrogenases in E. coli BW25113, catalyzing the degradation of cis-dihydrodiendiols into catechols. This approach is based on the screening of dehydrogenase deficient KEIO strains, regarding their incapability of degrading a cis-dihydrodiendiol of choice. • Novel screening strategy for E. coli BW25113 dehydrogenase knock-outs, incapable of degrading cis-dihydrodiendiols was validated for cis-1,2-dihydrocatechol as substrate; • Corresponding knock-outs can be used for recombinant production of cis-dihydrodiendiols; • Simple analysis based on liquid chromatography with diode array detector (HPLC-DAD). Elsevier 2020-11-13 /pmc/articles/PMC7704418/ /pubmed/33299804 http://dx.doi.org/10.1016/j.mex.2020.101143 Text en © 2020 The Author(s). Published by Elsevier B.V. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Method Article Wissner, Julian L. Ludwig, Julian Escobedo-Hinojosa, Wendy Hauer, Bernhard Strategy for identification of cis-dihydrodiendiol-degrading dehydrogenases in E. coli BW25113 |
title | Strategy for identification of cis-dihydrodiendiol-degrading dehydrogenases in E. coli BW25113 |
title_full | Strategy for identification of cis-dihydrodiendiol-degrading dehydrogenases in E. coli BW25113 |
title_fullStr | Strategy for identification of cis-dihydrodiendiol-degrading dehydrogenases in E. coli BW25113 |
title_full_unstemmed | Strategy for identification of cis-dihydrodiendiol-degrading dehydrogenases in E. coli BW25113 |
title_short | Strategy for identification of cis-dihydrodiendiol-degrading dehydrogenases in E. coli BW25113 |
title_sort | strategy for identification of cis-dihydrodiendiol-degrading dehydrogenases in e. coli bw25113 |
topic | Method Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7704418/ https://www.ncbi.nlm.nih.gov/pubmed/33299804 http://dx.doi.org/10.1016/j.mex.2020.101143 |
work_keys_str_mv | AT wissnerjulianl strategyforidentificationofcisdihydrodiendioldegradingdehydrogenasesinecolibw25113 AT ludwigjulian strategyforidentificationofcisdihydrodiendioldegradingdehydrogenasesinecolibw25113 AT escobedohinojosawendy strategyforidentificationofcisdihydrodiendioldegradingdehydrogenasesinecolibw25113 AT hauerbernhard strategyforidentificationofcisdihydrodiendioldegradingdehydrogenasesinecolibw25113 |