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Strategy for identification of cis-dihydrodiendiol-degrading dehydrogenases in E. coli BW25113

cis-Dihydrodiendiols are valuable compounds, finding multiple application as chiral synthons in organic chemistry. The biotechnological route for the generation of cis-dihydrodiendiols involves the dihydroxylation of aromatic compounds, catalyzed by Rieske non-heme iron dioxygenases. To date, numero...

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Autores principales: Wissner, Julian L., Ludwig, Julian, Escobedo-Hinojosa, Wendy, Hauer, Bernhard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7704418/
https://www.ncbi.nlm.nih.gov/pubmed/33299804
http://dx.doi.org/10.1016/j.mex.2020.101143
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author Wissner, Julian L.
Ludwig, Julian
Escobedo-Hinojosa, Wendy
Hauer, Bernhard
author_facet Wissner, Julian L.
Ludwig, Julian
Escobedo-Hinojosa, Wendy
Hauer, Bernhard
author_sort Wissner, Julian L.
collection PubMed
description cis-Dihydrodiendiols are valuable compounds, finding multiple application as chiral synthons in organic chemistry. The biotechnological route for the generation of cis-dihydrodiendiols involves the dihydroxylation of aromatic compounds, catalyzed by Rieske non-heme iron dioxygenases. To date, numerous examples of recombinant E. coli, harboring such dioxygenases, can be found in the literature. Nevertheless, there is only a minor number of publications, addressing the E. coli catalyzed degradation of cis-dihydrodiendiols into catechols via dehydrogenases. Identification and elimination of such dehydrogenase catalyzed degradation is key for the establishment of enhanced recombinant E. coli platforms pursuing the production of cis-dihydrodiendiols. Here, we provide a fast and easy strategy for the identification of promiscuous alcohol dehydrogenases in E. coli BW25113, catalyzing the degradation of cis-dihydrodiendiols into catechols. This approach is based on the screening of dehydrogenase deficient KEIO strains, regarding their incapability of degrading a cis-dihydrodiendiol of choice. • Novel screening strategy for E. coli BW25113 dehydrogenase knock-outs, incapable of degrading cis-dihydrodiendiols was validated for cis-1,2-dihydrocatechol as substrate; • Corresponding knock-outs can be used for recombinant production of cis-dihydrodiendiols; • Simple analysis based on liquid chromatography with diode array detector (HPLC-DAD).
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spelling pubmed-77044182020-12-08 Strategy for identification of cis-dihydrodiendiol-degrading dehydrogenases in E. coli BW25113 Wissner, Julian L. Ludwig, Julian Escobedo-Hinojosa, Wendy Hauer, Bernhard MethodsX Method Article cis-Dihydrodiendiols are valuable compounds, finding multiple application as chiral synthons in organic chemistry. The biotechnological route for the generation of cis-dihydrodiendiols involves the dihydroxylation of aromatic compounds, catalyzed by Rieske non-heme iron dioxygenases. To date, numerous examples of recombinant E. coli, harboring such dioxygenases, can be found in the literature. Nevertheless, there is only a minor number of publications, addressing the E. coli catalyzed degradation of cis-dihydrodiendiols into catechols via dehydrogenases. Identification and elimination of such dehydrogenase catalyzed degradation is key for the establishment of enhanced recombinant E. coli platforms pursuing the production of cis-dihydrodiendiols. Here, we provide a fast and easy strategy for the identification of promiscuous alcohol dehydrogenases in E. coli BW25113, catalyzing the degradation of cis-dihydrodiendiols into catechols. This approach is based on the screening of dehydrogenase deficient KEIO strains, regarding their incapability of degrading a cis-dihydrodiendiol of choice. • Novel screening strategy for E. coli BW25113 dehydrogenase knock-outs, incapable of degrading cis-dihydrodiendiols was validated for cis-1,2-dihydrocatechol as substrate; • Corresponding knock-outs can be used for recombinant production of cis-dihydrodiendiols; • Simple analysis based on liquid chromatography with diode array detector (HPLC-DAD). Elsevier 2020-11-13 /pmc/articles/PMC7704418/ /pubmed/33299804 http://dx.doi.org/10.1016/j.mex.2020.101143 Text en © 2020 The Author(s). Published by Elsevier B.V. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Method Article
Wissner, Julian L.
Ludwig, Julian
Escobedo-Hinojosa, Wendy
Hauer, Bernhard
Strategy for identification of cis-dihydrodiendiol-degrading dehydrogenases in E. coli BW25113
title Strategy for identification of cis-dihydrodiendiol-degrading dehydrogenases in E. coli BW25113
title_full Strategy for identification of cis-dihydrodiendiol-degrading dehydrogenases in E. coli BW25113
title_fullStr Strategy for identification of cis-dihydrodiendiol-degrading dehydrogenases in E. coli BW25113
title_full_unstemmed Strategy for identification of cis-dihydrodiendiol-degrading dehydrogenases in E. coli BW25113
title_short Strategy for identification of cis-dihydrodiendiol-degrading dehydrogenases in E. coli BW25113
title_sort strategy for identification of cis-dihydrodiendiol-degrading dehydrogenases in e. coli bw25113
topic Method Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7704418/
https://www.ncbi.nlm.nih.gov/pubmed/33299804
http://dx.doi.org/10.1016/j.mex.2020.101143
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