Cargando…
An EAV-HP insertion in the 5ʹ flanking region of SLCO1B3 is associated with its tissue-expression profile in blue-eggshell Yimeng chickens (Gallus gallus)
We previously reported that blue eggshell color in chickens is associated with a partial endogenous retroviral (EAV-HP) insertion in the promoter region of the solute carrier organic anion transporter family member 1B3 (SLCO1B3) gene. The EAV-HP sequence includes numerous regulatory elements, which...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7704947/ https://www.ncbi.nlm.nih.gov/pubmed/33248552 http://dx.doi.org/10.1016/j.psj.2020.09.002 |
_version_ | 1783616862423089152 |
---|---|
author | Chen, Jianfei Dalirsefat, Seyed Benyamin Han, Deping Dong, Xianggui Hua, Guoying Zheng, Xiaotong Xia, Tianlan Shao, Tianqi Deng, Xuemei Wu, Changxin |
author_facet | Chen, Jianfei Dalirsefat, Seyed Benyamin Han, Deping Dong, Xianggui Hua, Guoying Zheng, Xiaotong Xia, Tianlan Shao, Tianqi Deng, Xuemei Wu, Changxin |
author_sort | Chen, Jianfei |
collection | PubMed |
description | We previously reported that blue eggshell color in chickens is associated with a partial endogenous retroviral (EAV-HP) insertion in the promoter region of the solute carrier organic anion transporter family member 1B3 (SLCO1B3) gene. The EAV-HP sequence includes numerous regulatory elements, which may modulate the expression of adjacent genes. To determine whether this insertion influences the expression of neighboring genes, we screened the expression of solute carrier organic anion transporter family members 1C1, 1B1 (SLCO1C1, SLCO1B1), and SLCO1B3 in 13 and 10 tissues from female and male Yimeng chickens, respectively. We observed that the insertion only significantly modulated the expression of SLCO1B3 and did not majorly affect that of SLCO1C1 and SLCO1B1. High expression of SLCO1B3 was detected in the shell gland, magnum, isthmus, and vagina of the oviduct in female blue-eggshell chickens. We also observed ectopic expression of SLCO1B3 in the testes of male chickens. SLCO1B3 is typically highly expressed in the liver; however, the EAV-HP insertion significantly reduces SLCO1B3 expression. As a liver-specific transporter, a reduction in the expression of SLCO1B3 may affect liver metabolism, particularly that of bile acids. We also detected higher ectopic expression of SLCO1B3 in the lungs of birds heterozygous for the EAV-HP insertion than in homozygous genotypes. In conclusion, we confirmed that the EAV-HP insertion modifies SLCO1B3 expression, and showed, for the first time, similar expression profile of this gene in all parts of the oviduct in females and testis in males. We also observed different levels of SLCO1B3 expression in the liver, which were associated with the EAV-HP insertion, and significantly higher expression in the lungs of birds with heterozygous genotype. The effects of these changes in the SLCO1B3 expression pattern on the function of the tissues warrant further investigation. |
format | Online Article Text |
id | pubmed-7704947 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-77049472020-12-08 An EAV-HP insertion in the 5ʹ flanking region of SLCO1B3 is associated with its tissue-expression profile in blue-eggshell Yimeng chickens (Gallus gallus) Chen, Jianfei Dalirsefat, Seyed Benyamin Han, Deping Dong, Xianggui Hua, Guoying Zheng, Xiaotong Xia, Tianlan Shao, Tianqi Deng, Xuemei Wu, Changxin Poult Sci Genetics and Molecular Biology We previously reported that blue eggshell color in chickens is associated with a partial endogenous retroviral (EAV-HP) insertion in the promoter region of the solute carrier organic anion transporter family member 1B3 (SLCO1B3) gene. The EAV-HP sequence includes numerous regulatory elements, which may modulate the expression of adjacent genes. To determine whether this insertion influences the expression of neighboring genes, we screened the expression of solute carrier organic anion transporter family members 1C1, 1B1 (SLCO1C1, SLCO1B1), and SLCO1B3 in 13 and 10 tissues from female and male Yimeng chickens, respectively. We observed that the insertion only significantly modulated the expression of SLCO1B3 and did not majorly affect that of SLCO1C1 and SLCO1B1. High expression of SLCO1B3 was detected in the shell gland, magnum, isthmus, and vagina of the oviduct in female blue-eggshell chickens. We also observed ectopic expression of SLCO1B3 in the testes of male chickens. SLCO1B3 is typically highly expressed in the liver; however, the EAV-HP insertion significantly reduces SLCO1B3 expression. As a liver-specific transporter, a reduction in the expression of SLCO1B3 may affect liver metabolism, particularly that of bile acids. We also detected higher ectopic expression of SLCO1B3 in the lungs of birds heterozygous for the EAV-HP insertion than in homozygous genotypes. In conclusion, we confirmed that the EAV-HP insertion modifies SLCO1B3 expression, and showed, for the first time, similar expression profile of this gene in all parts of the oviduct in females and testis in males. We also observed different levels of SLCO1B3 expression in the liver, which were associated with the EAV-HP insertion, and significantly higher expression in the lungs of birds with heterozygous genotype. The effects of these changes in the SLCO1B3 expression pattern on the function of the tissues warrant further investigation. Elsevier 2020-09-15 /pmc/articles/PMC7704947/ /pubmed/33248552 http://dx.doi.org/10.1016/j.psj.2020.09.002 Text en © 2020 Published by Elsevier Inc. on behalf of Poultry Science Association Inc. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Genetics and Molecular Biology Chen, Jianfei Dalirsefat, Seyed Benyamin Han, Deping Dong, Xianggui Hua, Guoying Zheng, Xiaotong Xia, Tianlan Shao, Tianqi Deng, Xuemei Wu, Changxin An EAV-HP insertion in the 5ʹ flanking region of SLCO1B3 is associated with its tissue-expression profile in blue-eggshell Yimeng chickens (Gallus gallus) |
title | An EAV-HP insertion in the 5ʹ flanking region of SLCO1B3 is associated with its tissue-expression profile in blue-eggshell Yimeng chickens (Gallus gallus) |
title_full | An EAV-HP insertion in the 5ʹ flanking region of SLCO1B3 is associated with its tissue-expression profile in blue-eggshell Yimeng chickens (Gallus gallus) |
title_fullStr | An EAV-HP insertion in the 5ʹ flanking region of SLCO1B3 is associated with its tissue-expression profile in blue-eggshell Yimeng chickens (Gallus gallus) |
title_full_unstemmed | An EAV-HP insertion in the 5ʹ flanking region of SLCO1B3 is associated with its tissue-expression profile in blue-eggshell Yimeng chickens (Gallus gallus) |
title_short | An EAV-HP insertion in the 5ʹ flanking region of SLCO1B3 is associated with its tissue-expression profile in blue-eggshell Yimeng chickens (Gallus gallus) |
title_sort | eav-hp insertion in the 5ʹ flanking region of slco1b3 is associated with its tissue-expression profile in blue-eggshell yimeng chickens (gallus gallus) |
topic | Genetics and Molecular Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7704947/ https://www.ncbi.nlm.nih.gov/pubmed/33248552 http://dx.doi.org/10.1016/j.psj.2020.09.002 |
work_keys_str_mv | AT chenjianfei aneavhpinsertioninthe5ʹflankingregionofslco1b3isassociatedwithitstissueexpressionprofileinblueeggshellyimengchickensgallusgallus AT dalirsefatseyedbenyamin aneavhpinsertioninthe5ʹflankingregionofslco1b3isassociatedwithitstissueexpressionprofileinblueeggshellyimengchickensgallusgallus AT handeping aneavhpinsertioninthe5ʹflankingregionofslco1b3isassociatedwithitstissueexpressionprofileinblueeggshellyimengchickensgallusgallus AT dongxianggui aneavhpinsertioninthe5ʹflankingregionofslco1b3isassociatedwithitstissueexpressionprofileinblueeggshellyimengchickensgallusgallus AT huaguoying aneavhpinsertioninthe5ʹflankingregionofslco1b3isassociatedwithitstissueexpressionprofileinblueeggshellyimengchickensgallusgallus AT zhengxiaotong aneavhpinsertioninthe5ʹflankingregionofslco1b3isassociatedwithitstissueexpressionprofileinblueeggshellyimengchickensgallusgallus AT xiatianlan aneavhpinsertioninthe5ʹflankingregionofslco1b3isassociatedwithitstissueexpressionprofileinblueeggshellyimengchickensgallusgallus AT shaotianqi aneavhpinsertioninthe5ʹflankingregionofslco1b3isassociatedwithitstissueexpressionprofileinblueeggshellyimengchickensgallusgallus AT dengxuemei aneavhpinsertioninthe5ʹflankingregionofslco1b3isassociatedwithitstissueexpressionprofileinblueeggshellyimengchickensgallusgallus AT wuchangxin aneavhpinsertioninthe5ʹflankingregionofslco1b3isassociatedwithitstissueexpressionprofileinblueeggshellyimengchickensgallusgallus AT chenjianfei eavhpinsertioninthe5ʹflankingregionofslco1b3isassociatedwithitstissueexpressionprofileinblueeggshellyimengchickensgallusgallus AT dalirsefatseyedbenyamin eavhpinsertioninthe5ʹflankingregionofslco1b3isassociatedwithitstissueexpressionprofileinblueeggshellyimengchickensgallusgallus AT handeping eavhpinsertioninthe5ʹflankingregionofslco1b3isassociatedwithitstissueexpressionprofileinblueeggshellyimengchickensgallusgallus AT dongxianggui eavhpinsertioninthe5ʹflankingregionofslco1b3isassociatedwithitstissueexpressionprofileinblueeggshellyimengchickensgallusgallus AT huaguoying eavhpinsertioninthe5ʹflankingregionofslco1b3isassociatedwithitstissueexpressionprofileinblueeggshellyimengchickensgallusgallus AT zhengxiaotong eavhpinsertioninthe5ʹflankingregionofslco1b3isassociatedwithitstissueexpressionprofileinblueeggshellyimengchickensgallusgallus AT xiatianlan eavhpinsertioninthe5ʹflankingregionofslco1b3isassociatedwithitstissueexpressionprofileinblueeggshellyimengchickensgallusgallus AT shaotianqi eavhpinsertioninthe5ʹflankingregionofslco1b3isassociatedwithitstissueexpressionprofileinblueeggshellyimengchickensgallusgallus AT dengxuemei eavhpinsertioninthe5ʹflankingregionofslco1b3isassociatedwithitstissueexpressionprofileinblueeggshellyimengchickensgallusgallus AT wuchangxin eavhpinsertioninthe5ʹflankingregionofslco1b3isassociatedwithitstissueexpressionprofileinblueeggshellyimengchickensgallusgallus |