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An EAV-HP insertion in the 5ʹ flanking region of SLCO1B3 is associated with its tissue-expression profile in blue-eggshell Yimeng chickens (Gallus gallus)

We previously reported that blue eggshell color in chickens is associated with a partial endogenous retroviral (EAV-HP) insertion in the promoter region of the solute carrier organic anion transporter family member 1B3 (SLCO1B3) gene. The EAV-HP sequence includes numerous regulatory elements, which...

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Autores principales: Chen, Jianfei, Dalirsefat, Seyed Benyamin, Han, Deping, Dong, Xianggui, Hua, Guoying, Zheng, Xiaotong, Xia, Tianlan, Shao, Tianqi, Deng, Xuemei, Wu, Changxin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7704947/
https://www.ncbi.nlm.nih.gov/pubmed/33248552
http://dx.doi.org/10.1016/j.psj.2020.09.002
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author Chen, Jianfei
Dalirsefat, Seyed Benyamin
Han, Deping
Dong, Xianggui
Hua, Guoying
Zheng, Xiaotong
Xia, Tianlan
Shao, Tianqi
Deng, Xuemei
Wu, Changxin
author_facet Chen, Jianfei
Dalirsefat, Seyed Benyamin
Han, Deping
Dong, Xianggui
Hua, Guoying
Zheng, Xiaotong
Xia, Tianlan
Shao, Tianqi
Deng, Xuemei
Wu, Changxin
author_sort Chen, Jianfei
collection PubMed
description We previously reported that blue eggshell color in chickens is associated with a partial endogenous retroviral (EAV-HP) insertion in the promoter region of the solute carrier organic anion transporter family member 1B3 (SLCO1B3) gene. The EAV-HP sequence includes numerous regulatory elements, which may modulate the expression of adjacent genes. To determine whether this insertion influences the expression of neighboring genes, we screened the expression of solute carrier organic anion transporter family members 1C1, 1B1 (SLCO1C1, SLCO1B1), and SLCO1B3 in 13 and 10 tissues from female and male Yimeng chickens, respectively. We observed that the insertion only significantly modulated the expression of SLCO1B3 and did not majorly affect that of SLCO1C1 and SLCO1B1. High expression of SLCO1B3 was detected in the shell gland, magnum, isthmus, and vagina of the oviduct in female blue-eggshell chickens. We also observed ectopic expression of SLCO1B3 in the testes of male chickens. SLCO1B3 is typically highly expressed in the liver; however, the EAV-HP insertion significantly reduces SLCO1B3 expression. As a liver-specific transporter, a reduction in the expression of SLCO1B3 may affect liver metabolism, particularly that of bile acids. We also detected higher ectopic expression of SLCO1B3 in the lungs of birds heterozygous for the EAV-HP insertion than in homozygous genotypes. In conclusion, we confirmed that the EAV-HP insertion modifies SLCO1B3 expression, and showed, for the first time, similar expression profile of this gene in all parts of the oviduct in females and testis in males. We also observed different levels of SLCO1B3 expression in the liver, which were associated with the EAV-HP insertion, and significantly higher expression in the lungs of birds with heterozygous genotype. The effects of these changes in the SLCO1B3 expression pattern on the function of the tissues warrant further investigation.
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spelling pubmed-77049472020-12-08 An EAV-HP insertion in the 5ʹ flanking region of SLCO1B3 is associated with its tissue-expression profile in blue-eggshell Yimeng chickens (Gallus gallus) Chen, Jianfei Dalirsefat, Seyed Benyamin Han, Deping Dong, Xianggui Hua, Guoying Zheng, Xiaotong Xia, Tianlan Shao, Tianqi Deng, Xuemei Wu, Changxin Poult Sci Genetics and Molecular Biology We previously reported that blue eggshell color in chickens is associated with a partial endogenous retroviral (EAV-HP) insertion in the promoter region of the solute carrier organic anion transporter family member 1B3 (SLCO1B3) gene. The EAV-HP sequence includes numerous regulatory elements, which may modulate the expression of adjacent genes. To determine whether this insertion influences the expression of neighboring genes, we screened the expression of solute carrier organic anion transporter family members 1C1, 1B1 (SLCO1C1, SLCO1B1), and SLCO1B3 in 13 and 10 tissues from female and male Yimeng chickens, respectively. We observed that the insertion only significantly modulated the expression of SLCO1B3 and did not majorly affect that of SLCO1C1 and SLCO1B1. High expression of SLCO1B3 was detected in the shell gland, magnum, isthmus, and vagina of the oviduct in female blue-eggshell chickens. We also observed ectopic expression of SLCO1B3 in the testes of male chickens. SLCO1B3 is typically highly expressed in the liver; however, the EAV-HP insertion significantly reduces SLCO1B3 expression. As a liver-specific transporter, a reduction in the expression of SLCO1B3 may affect liver metabolism, particularly that of bile acids. We also detected higher ectopic expression of SLCO1B3 in the lungs of birds heterozygous for the EAV-HP insertion than in homozygous genotypes. In conclusion, we confirmed that the EAV-HP insertion modifies SLCO1B3 expression, and showed, for the first time, similar expression profile of this gene in all parts of the oviduct in females and testis in males. We also observed different levels of SLCO1B3 expression in the liver, which were associated with the EAV-HP insertion, and significantly higher expression in the lungs of birds with heterozygous genotype. The effects of these changes in the SLCO1B3 expression pattern on the function of the tissues warrant further investigation. Elsevier 2020-09-15 /pmc/articles/PMC7704947/ /pubmed/33248552 http://dx.doi.org/10.1016/j.psj.2020.09.002 Text en © 2020 Published by Elsevier Inc. on behalf of Poultry Science Association Inc. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Genetics and Molecular Biology
Chen, Jianfei
Dalirsefat, Seyed Benyamin
Han, Deping
Dong, Xianggui
Hua, Guoying
Zheng, Xiaotong
Xia, Tianlan
Shao, Tianqi
Deng, Xuemei
Wu, Changxin
An EAV-HP insertion in the 5ʹ flanking region of SLCO1B3 is associated with its tissue-expression profile in blue-eggshell Yimeng chickens (Gallus gallus)
title An EAV-HP insertion in the 5ʹ flanking region of SLCO1B3 is associated with its tissue-expression profile in blue-eggshell Yimeng chickens (Gallus gallus)
title_full An EAV-HP insertion in the 5ʹ flanking region of SLCO1B3 is associated with its tissue-expression profile in blue-eggshell Yimeng chickens (Gallus gallus)
title_fullStr An EAV-HP insertion in the 5ʹ flanking region of SLCO1B3 is associated with its tissue-expression profile in blue-eggshell Yimeng chickens (Gallus gallus)
title_full_unstemmed An EAV-HP insertion in the 5ʹ flanking region of SLCO1B3 is associated with its tissue-expression profile in blue-eggshell Yimeng chickens (Gallus gallus)
title_short An EAV-HP insertion in the 5ʹ flanking region of SLCO1B3 is associated with its tissue-expression profile in blue-eggshell Yimeng chickens (Gallus gallus)
title_sort eav-hp insertion in the 5ʹ flanking region of slco1b3 is associated with its tissue-expression profile in blue-eggshell yimeng chickens (gallus gallus)
topic Genetics and Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7704947/
https://www.ncbi.nlm.nih.gov/pubmed/33248552
http://dx.doi.org/10.1016/j.psj.2020.09.002
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