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Understanding contagion dynamics through microscopic processes in active Brownian particles

Together with the universally recognized SIR model, several approaches have been employed to understand the contagion dynamics of interacting particles. Here, Active Brownian particles (ABP) are introduced to model the contagion dynamics of living agents that perform a horizontal transmission of an...

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Autores principales: Norambuena, Ariel, Valencia, Felipe J., Guzmán-Lastra, Francisca
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7705763/
https://www.ncbi.nlm.nih.gov/pubmed/33257706
http://dx.doi.org/10.1038/s41598-020-77860-y
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author Norambuena, Ariel
Valencia, Felipe J.
Guzmán-Lastra, Francisca
author_facet Norambuena, Ariel
Valencia, Felipe J.
Guzmán-Lastra, Francisca
author_sort Norambuena, Ariel
collection PubMed
description Together with the universally recognized SIR model, several approaches have been employed to understand the contagion dynamics of interacting particles. Here, Active Brownian particles (ABP) are introduced to model the contagion dynamics of living agents that perform a horizontal transmission of an infectious disease in space and time. By performing an ensemble average description of the ABP simulations, we statistically describe susceptible, infected, and recovered groups in terms of particle densities, activity, contagious rates, and random recovery times. Our results show that ABP reproduces the time dependence observed in traditional compartmental models such as the Susceptible-Infected-Recovery (SIR) models and allows us to explore the critical densities and the contagious radius that facilitates the virus spread. Furthermore, we derive a first-principles analytical expression for the contagion rate in terms of microscopic parameters, without considering free parameters as the classical SIR-based models. This approach offers a novel alternative to incorporate microscopic processes into analyzing SIR-based models with applications in a wide range of biological systems.
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spelling pubmed-77057632020-12-02 Understanding contagion dynamics through microscopic processes in active Brownian particles Norambuena, Ariel Valencia, Felipe J. Guzmán-Lastra, Francisca Sci Rep Article Together with the universally recognized SIR model, several approaches have been employed to understand the contagion dynamics of interacting particles. Here, Active Brownian particles (ABP) are introduced to model the contagion dynamics of living agents that perform a horizontal transmission of an infectious disease in space and time. By performing an ensemble average description of the ABP simulations, we statistically describe susceptible, infected, and recovered groups in terms of particle densities, activity, contagious rates, and random recovery times. Our results show that ABP reproduces the time dependence observed in traditional compartmental models such as the Susceptible-Infected-Recovery (SIR) models and allows us to explore the critical densities and the contagious radius that facilitates the virus spread. Furthermore, we derive a first-principles analytical expression for the contagion rate in terms of microscopic parameters, without considering free parameters as the classical SIR-based models. This approach offers a novel alternative to incorporate microscopic processes into analyzing SIR-based models with applications in a wide range of biological systems. Nature Publishing Group UK 2020-11-30 /pmc/articles/PMC7705763/ /pubmed/33257706 http://dx.doi.org/10.1038/s41598-020-77860-y Text en © The Author(s) 2020, corrected publication 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Norambuena, Ariel
Valencia, Felipe J.
Guzmán-Lastra, Francisca
Understanding contagion dynamics through microscopic processes in active Brownian particles
title Understanding contagion dynamics through microscopic processes in active Brownian particles
title_full Understanding contagion dynamics through microscopic processes in active Brownian particles
title_fullStr Understanding contagion dynamics through microscopic processes in active Brownian particles
title_full_unstemmed Understanding contagion dynamics through microscopic processes in active Brownian particles
title_short Understanding contagion dynamics through microscopic processes in active Brownian particles
title_sort understanding contagion dynamics through microscopic processes in active brownian particles
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7705763/
https://www.ncbi.nlm.nih.gov/pubmed/33257706
http://dx.doi.org/10.1038/s41598-020-77860-y
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