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Understanding contagion dynamics through microscopic processes in active Brownian particles
Together with the universally recognized SIR model, several approaches have been employed to understand the contagion dynamics of interacting particles. Here, Active Brownian particles (ABP) are introduced to model the contagion dynamics of living agents that perform a horizontal transmission of an...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7705763/ https://www.ncbi.nlm.nih.gov/pubmed/33257706 http://dx.doi.org/10.1038/s41598-020-77860-y |
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author | Norambuena, Ariel Valencia, Felipe J. Guzmán-Lastra, Francisca |
author_facet | Norambuena, Ariel Valencia, Felipe J. Guzmán-Lastra, Francisca |
author_sort | Norambuena, Ariel |
collection | PubMed |
description | Together with the universally recognized SIR model, several approaches have been employed to understand the contagion dynamics of interacting particles. Here, Active Brownian particles (ABP) are introduced to model the contagion dynamics of living agents that perform a horizontal transmission of an infectious disease in space and time. By performing an ensemble average description of the ABP simulations, we statistically describe susceptible, infected, and recovered groups in terms of particle densities, activity, contagious rates, and random recovery times. Our results show that ABP reproduces the time dependence observed in traditional compartmental models such as the Susceptible-Infected-Recovery (SIR) models and allows us to explore the critical densities and the contagious radius that facilitates the virus spread. Furthermore, we derive a first-principles analytical expression for the contagion rate in terms of microscopic parameters, without considering free parameters as the classical SIR-based models. This approach offers a novel alternative to incorporate microscopic processes into analyzing SIR-based models with applications in a wide range of biological systems. |
format | Online Article Text |
id | pubmed-7705763 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-77057632020-12-02 Understanding contagion dynamics through microscopic processes in active Brownian particles Norambuena, Ariel Valencia, Felipe J. Guzmán-Lastra, Francisca Sci Rep Article Together with the universally recognized SIR model, several approaches have been employed to understand the contagion dynamics of interacting particles. Here, Active Brownian particles (ABP) are introduced to model the contagion dynamics of living agents that perform a horizontal transmission of an infectious disease in space and time. By performing an ensemble average description of the ABP simulations, we statistically describe susceptible, infected, and recovered groups in terms of particle densities, activity, contagious rates, and random recovery times. Our results show that ABP reproduces the time dependence observed in traditional compartmental models such as the Susceptible-Infected-Recovery (SIR) models and allows us to explore the critical densities and the contagious radius that facilitates the virus spread. Furthermore, we derive a first-principles analytical expression for the contagion rate in terms of microscopic parameters, without considering free parameters as the classical SIR-based models. This approach offers a novel alternative to incorporate microscopic processes into analyzing SIR-based models with applications in a wide range of biological systems. Nature Publishing Group UK 2020-11-30 /pmc/articles/PMC7705763/ /pubmed/33257706 http://dx.doi.org/10.1038/s41598-020-77860-y Text en © The Author(s) 2020, corrected publication 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Norambuena, Ariel Valencia, Felipe J. Guzmán-Lastra, Francisca Understanding contagion dynamics through microscopic processes in active Brownian particles |
title | Understanding contagion dynamics through microscopic processes in active Brownian particles |
title_full | Understanding contagion dynamics through microscopic processes in active Brownian particles |
title_fullStr | Understanding contagion dynamics through microscopic processes in active Brownian particles |
title_full_unstemmed | Understanding contagion dynamics through microscopic processes in active Brownian particles |
title_short | Understanding contagion dynamics through microscopic processes in active Brownian particles |
title_sort | understanding contagion dynamics through microscopic processes in active brownian particles |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7705763/ https://www.ncbi.nlm.nih.gov/pubmed/33257706 http://dx.doi.org/10.1038/s41598-020-77860-y |
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