Cargando…
Hyperpolarized NMR Metabolomics at Natural (13)C Abundance
[Image: see text] Metabolomics plays a pivotal role in systems biology, and NMR is a central tool with high precision and exceptional resolution of chemical information. Most NMR metabolomic studies are based on (1)H 1D spectroscopy, severely limited by peak overlap. (13)C NMR benefits from a larger...
Autores principales: | , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American
Chemical
Society
2020
|
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7705890/ https://www.ncbi.nlm.nih.gov/pubmed/33136383 http://dx.doi.org/10.1021/acs.analchem.0c03510 |
_version_ | 1783617042301059072 |
---|---|
author | Dey, Arnab Charrier, Benoît Martineau, Estelle Deborde, Catherine Gandriau, Elodie Moing, Annick Jacob, Daniel Eshchenko, Dmitry Schnell, Marc Melzi, Roberto Kurzbach, Dennis Ceillier, Morgan Chappuis, Quentin Cousin, Samuel F. Kempf, James G. Jannin, Sami Dumez, Jean-Nicolas Giraudeau, Patrick |
author_facet | Dey, Arnab Charrier, Benoît Martineau, Estelle Deborde, Catherine Gandriau, Elodie Moing, Annick Jacob, Daniel Eshchenko, Dmitry Schnell, Marc Melzi, Roberto Kurzbach, Dennis Ceillier, Morgan Chappuis, Quentin Cousin, Samuel F. Kempf, James G. Jannin, Sami Dumez, Jean-Nicolas Giraudeau, Patrick |
author_sort | Dey, Arnab |
collection | PubMed |
description | [Image: see text] Metabolomics plays a pivotal role in systems biology, and NMR is a central tool with high precision and exceptional resolution of chemical information. Most NMR metabolomic studies are based on (1)H 1D spectroscopy, severely limited by peak overlap. (13)C NMR benefits from a larger signal dispersion but is barely used in metabolomics due to ca. 6000-fold lower sensitivity. We introduce a new approach, based on hyperpolarized (13)C NMR at natural abundance, that circumvents this limitation. A new untargeted NMR-based metabolomic workflow based on dissolution dynamic nuclear polarization (d-DNP) for the first time enabled hyperpolarized natural abundance (13)C metabolomics. Statistical analysis of resulting hyperpolarized (13)C data distinguishes two groups of plant (tomato) extracts and highlights biomarkers, in full agreement with previous results on the same biological model. We also optimize parameters of the semiautomated d-DNP system suitable for high-throughput studies. |
format | Online Article Text |
id | pubmed-7705890 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | American
Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-77058902020-12-02 Hyperpolarized NMR Metabolomics at Natural (13)C Abundance Dey, Arnab Charrier, Benoît Martineau, Estelle Deborde, Catherine Gandriau, Elodie Moing, Annick Jacob, Daniel Eshchenko, Dmitry Schnell, Marc Melzi, Roberto Kurzbach, Dennis Ceillier, Morgan Chappuis, Quentin Cousin, Samuel F. Kempf, James G. Jannin, Sami Dumez, Jean-Nicolas Giraudeau, Patrick Anal Chem [Image: see text] Metabolomics plays a pivotal role in systems biology, and NMR is a central tool with high precision and exceptional resolution of chemical information. Most NMR metabolomic studies are based on (1)H 1D spectroscopy, severely limited by peak overlap. (13)C NMR benefits from a larger signal dispersion but is barely used in metabolomics due to ca. 6000-fold lower sensitivity. We introduce a new approach, based on hyperpolarized (13)C NMR at natural abundance, that circumvents this limitation. A new untargeted NMR-based metabolomic workflow based on dissolution dynamic nuclear polarization (d-DNP) for the first time enabled hyperpolarized natural abundance (13)C metabolomics. Statistical analysis of resulting hyperpolarized (13)C data distinguishes two groups of plant (tomato) extracts and highlights biomarkers, in full agreement with previous results on the same biological model. We also optimize parameters of the semiautomated d-DNP system suitable for high-throughput studies. American Chemical Society 2020-11-02 2020-11-17 /pmc/articles/PMC7705890/ /pubmed/33136383 http://dx.doi.org/10.1021/acs.analchem.0c03510 Text en © 2020 American Chemical Society This is an open access article published under an ACS AuthorChoice License (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) , which permits copying and redistribution of the article or any adaptations for non-commercial purposes. |
spellingShingle | Dey, Arnab Charrier, Benoît Martineau, Estelle Deborde, Catherine Gandriau, Elodie Moing, Annick Jacob, Daniel Eshchenko, Dmitry Schnell, Marc Melzi, Roberto Kurzbach, Dennis Ceillier, Morgan Chappuis, Quentin Cousin, Samuel F. Kempf, James G. Jannin, Sami Dumez, Jean-Nicolas Giraudeau, Patrick Hyperpolarized NMR Metabolomics at Natural (13)C Abundance |
title | Hyperpolarized NMR Metabolomics at Natural (13)C Abundance |
title_full | Hyperpolarized NMR Metabolomics at Natural (13)C Abundance |
title_fullStr | Hyperpolarized NMR Metabolomics at Natural (13)C Abundance |
title_full_unstemmed | Hyperpolarized NMR Metabolomics at Natural (13)C Abundance |
title_short | Hyperpolarized NMR Metabolomics at Natural (13)C Abundance |
title_sort | hyperpolarized nmr metabolomics at natural (13)c abundance |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7705890/ https://www.ncbi.nlm.nih.gov/pubmed/33136383 http://dx.doi.org/10.1021/acs.analchem.0c03510 |
work_keys_str_mv | AT deyarnab hyperpolarizednmrmetabolomicsatnatural13cabundance AT charrierbenoit hyperpolarizednmrmetabolomicsatnatural13cabundance AT martineauestelle hyperpolarizednmrmetabolomicsatnatural13cabundance AT debordecatherine hyperpolarizednmrmetabolomicsatnatural13cabundance AT gandriauelodie hyperpolarizednmrmetabolomicsatnatural13cabundance AT moingannick hyperpolarizednmrmetabolomicsatnatural13cabundance AT jacobdaniel hyperpolarizednmrmetabolomicsatnatural13cabundance AT eshchenkodmitry hyperpolarizednmrmetabolomicsatnatural13cabundance AT schnellmarc hyperpolarizednmrmetabolomicsatnatural13cabundance AT melziroberto hyperpolarizednmrmetabolomicsatnatural13cabundance AT kurzbachdennis hyperpolarizednmrmetabolomicsatnatural13cabundance AT ceilliermorgan hyperpolarizednmrmetabolomicsatnatural13cabundance AT chappuisquentin hyperpolarizednmrmetabolomicsatnatural13cabundance AT cousinsamuelf hyperpolarizednmrmetabolomicsatnatural13cabundance AT kempfjamesg hyperpolarizednmrmetabolomicsatnatural13cabundance AT janninsami hyperpolarizednmrmetabolomicsatnatural13cabundance AT dumezjeannicolas hyperpolarizednmrmetabolomicsatnatural13cabundance AT giraudeaupatrick hyperpolarizednmrmetabolomicsatnatural13cabundance |