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Ground-Based LiDAR Improves Phenotypic Repeatability of Above-Ground Biomass and Crop Growth Rate in Wheat

Highly repeatable, nondestructive, and high-throughput measures of above-ground biomass (AGB) and crop growth rate (CGR) are important for wheat improvement programs. This study evaluates the repeatability of destructive AGB and CGR measurements in comparison to two previously described methods for...

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Autores principales: Deery, David M., Rebetzke, Greg J., Jimenez-Berni, Jose A., Condon, Anthony G., Smith, David J., Bechaz, Kathryn M., Bovill, William D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: AAAS 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706344/
https://www.ncbi.nlm.nih.gov/pubmed/33313565
http://dx.doi.org/10.34133/2020/8329798
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author Deery, David M.
Rebetzke, Greg J.
Jimenez-Berni, Jose A.
Condon, Anthony G.
Smith, David J.
Bechaz, Kathryn M.
Bovill, William D.
author_facet Deery, David M.
Rebetzke, Greg J.
Jimenez-Berni, Jose A.
Condon, Anthony G.
Smith, David J.
Bechaz, Kathryn M.
Bovill, William D.
author_sort Deery, David M.
collection PubMed
description Highly repeatable, nondestructive, and high-throughput measures of above-ground biomass (AGB) and crop growth rate (CGR) are important for wheat improvement programs. This study evaluates the repeatability of destructive AGB and CGR measurements in comparison to two previously described methods for the estimation of AGB from LiDAR: 3D voxel index (3DVI) and 3D profile index (3DPI). Across three field experiments, contrasting in available water supply and comprising up to 98 wheat genotypes varying for canopy architecture, several concurrent measurements of LiDAR and AGB were made from jointing to anthesis. Phenotypic correlations at discrete events between AGB and the LiDAR-derived biomass indices were significant, ranging from 0.31 (P < 0.05) to 0.86 (P < 0.0001), providing confidence in the LiDAR indices as effective surrogates for AGB. The repeatability of the LiDAR biomass indices at discrete events was at least similar to and often higher than AGB, particularly under water limitation. The correlations between calculated CGR for AGB and the LiDAR indices were moderate to high and varied between experiments. However, across all experiments, the repeatabilities of the CGR derived from the LiDAR indices were appreciably greater than those for AGB, except for the 3DPI in the water-limited environment. In our experiments, the repeatability of either LiDAR index was consistently higher than that of AGB, both at discrete time points and when CGR was calculated. These findings provide promising support for the reliable use of ground-based LiDAR, as a surrogate measure of AGB and CGR, for screening germplasm in research and wheat breeding.
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spelling pubmed-77063442020-12-10 Ground-Based LiDAR Improves Phenotypic Repeatability of Above-Ground Biomass and Crop Growth Rate in Wheat Deery, David M. Rebetzke, Greg J. Jimenez-Berni, Jose A. Condon, Anthony G. Smith, David J. Bechaz, Kathryn M. Bovill, William D. Plant Phenomics Research Article Highly repeatable, nondestructive, and high-throughput measures of above-ground biomass (AGB) and crop growth rate (CGR) are important for wheat improvement programs. This study evaluates the repeatability of destructive AGB and CGR measurements in comparison to two previously described methods for the estimation of AGB from LiDAR: 3D voxel index (3DVI) and 3D profile index (3DPI). Across three field experiments, contrasting in available water supply and comprising up to 98 wheat genotypes varying for canopy architecture, several concurrent measurements of LiDAR and AGB were made from jointing to anthesis. Phenotypic correlations at discrete events between AGB and the LiDAR-derived biomass indices were significant, ranging from 0.31 (P < 0.05) to 0.86 (P < 0.0001), providing confidence in the LiDAR indices as effective surrogates for AGB. The repeatability of the LiDAR biomass indices at discrete events was at least similar to and often higher than AGB, particularly under water limitation. The correlations between calculated CGR for AGB and the LiDAR indices were moderate to high and varied between experiments. However, across all experiments, the repeatabilities of the CGR derived from the LiDAR indices were appreciably greater than those for AGB, except for the 3DPI in the water-limited environment. In our experiments, the repeatability of either LiDAR index was consistently higher than that of AGB, both at discrete time points and when CGR was calculated. These findings provide promising support for the reliable use of ground-based LiDAR, as a surrogate measure of AGB and CGR, for screening germplasm in research and wheat breeding. AAAS 2020-05-26 /pmc/articles/PMC7706344/ /pubmed/33313565 http://dx.doi.org/10.34133/2020/8329798 Text en Copyright © 2020 David M. Deery et al. http://creativecommons.org/licenses/by/4.0/ Exclusive Licensee Nanjing Agricultural University. Distributed under a Creative Commons Attribution License (CC BY 4.0).
spellingShingle Research Article
Deery, David M.
Rebetzke, Greg J.
Jimenez-Berni, Jose A.
Condon, Anthony G.
Smith, David J.
Bechaz, Kathryn M.
Bovill, William D.
Ground-Based LiDAR Improves Phenotypic Repeatability of Above-Ground Biomass and Crop Growth Rate in Wheat
title Ground-Based LiDAR Improves Phenotypic Repeatability of Above-Ground Biomass and Crop Growth Rate in Wheat
title_full Ground-Based LiDAR Improves Phenotypic Repeatability of Above-Ground Biomass and Crop Growth Rate in Wheat
title_fullStr Ground-Based LiDAR Improves Phenotypic Repeatability of Above-Ground Biomass and Crop Growth Rate in Wheat
title_full_unstemmed Ground-Based LiDAR Improves Phenotypic Repeatability of Above-Ground Biomass and Crop Growth Rate in Wheat
title_short Ground-Based LiDAR Improves Phenotypic Repeatability of Above-Ground Biomass and Crop Growth Rate in Wheat
title_sort ground-based lidar improves phenotypic repeatability of above-ground biomass and crop growth rate in wheat
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706344/
https://www.ncbi.nlm.nih.gov/pubmed/33313565
http://dx.doi.org/10.34133/2020/8329798
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