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The complete chloroplast genome of Curcuma longa L. (Zingiberaceae)
Curcuma longa L. is a widely distributed medicinal plant in Southeast Asia, especially in China. In this study, we reported and characterized the complete chloroplast genome sequence of C. longa. The chloroplast genome was determined to be 162,255 bp in length. It contained large single-copy (LSC) a...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706451/ https://www.ncbi.nlm.nih.gov/pubmed/33365848 http://dx.doi.org/10.1080/23802359.2019.1666665 |
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author | Luo, Jie Li, Mingzhi Yang, Guo |
author_facet | Luo, Jie Li, Mingzhi Yang, Guo |
author_sort | Luo, Jie |
collection | PubMed |
description | Curcuma longa L. is a widely distributed medicinal plant in Southeast Asia, especially in China. In this study, we reported and characterized the complete chloroplast genome sequence of C. longa. The chloroplast genome was determined to be 162,255 bp in length. It contained large single-copy (LSC) and small single-copy (SSC) regions of 86,975 bp and 15,776 bp, respectively, which were separated by a pair of 29,752 bp inverted repeat (IR) regions. The genome is predicted to contain 133 genes, including 87 protein-coding genes, 38 tRNA genes, and eight rRNA genes. The overall GC content of the genome is 36.2%. A phylogenetic tree reconstructed by 23 chloroplast genomes reveals that C. longa is mostly related to Curcuma roscoeana, with bootstrap support values of 100%. |
format | Online Article Text |
id | pubmed-7706451 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77064512020-12-22 The complete chloroplast genome of Curcuma longa L. (Zingiberaceae) Luo, Jie Li, Mingzhi Yang, Guo Mitochondrial DNA B Resour Mitogenome Announcement Curcuma longa L. is a widely distributed medicinal plant in Southeast Asia, especially in China. In this study, we reported and characterized the complete chloroplast genome sequence of C. longa. The chloroplast genome was determined to be 162,255 bp in length. It contained large single-copy (LSC) and small single-copy (SSC) regions of 86,975 bp and 15,776 bp, respectively, which were separated by a pair of 29,752 bp inverted repeat (IR) regions. The genome is predicted to contain 133 genes, including 87 protein-coding genes, 38 tRNA genes, and eight rRNA genes. The overall GC content of the genome is 36.2%. A phylogenetic tree reconstructed by 23 chloroplast genomes reveals that C. longa is mostly related to Curcuma roscoeana, with bootstrap support values of 100%. Taylor & Francis 2019-09-18 /pmc/articles/PMC7706451/ /pubmed/33365848 http://dx.doi.org/10.1080/23802359.2019.1666665 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Luo, Jie Li, Mingzhi Yang, Guo The complete chloroplast genome of Curcuma longa L. (Zingiberaceae) |
title | The complete chloroplast genome of Curcuma longa L. (Zingiberaceae) |
title_full | The complete chloroplast genome of Curcuma longa L. (Zingiberaceae) |
title_fullStr | The complete chloroplast genome of Curcuma longa L. (Zingiberaceae) |
title_full_unstemmed | The complete chloroplast genome of Curcuma longa L. (Zingiberaceae) |
title_short | The complete chloroplast genome of Curcuma longa L. (Zingiberaceae) |
title_sort | complete chloroplast genome of curcuma longa l. (zingiberaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706451/ https://www.ncbi.nlm.nih.gov/pubmed/33365848 http://dx.doi.org/10.1080/23802359.2019.1666665 |
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