Complete chloroplast genome sequence of Heteroplexis incana (Asteraceae), a rare species endemic to China

Heteroplexis incana (Asteraceae) is a rare species endemic to China. Here, we report and characterize the complete chloroplast genome sequence of H. incana based on Illumina paired-end sequencing data. The complete plastid genome was 152,605 bp in length, which contained two inverted repeats (IRs) o...

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Detalles Bibliográficos
Autores principales: Qin, Fang, Shi, Yancai, Zhang, Ying, Wei, Xiao, Liu, Bingbing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706452/
https://www.ncbi.nlm.nih.gov/pubmed/33365842
http://dx.doi.org/10.1080/23802359.2019.1666685
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author Qin, Fang
Shi, Yancai
Zhang, Ying
Wei, Xiao
Liu, Bingbing
author_facet Qin, Fang
Shi, Yancai
Zhang, Ying
Wei, Xiao
Liu, Bingbing
author_sort Qin, Fang
collection PubMed
description Heteroplexis incana (Asteraceae) is a rare species endemic to China. Here, we report and characterize the complete chloroplast genome sequence of H. incana based on Illumina paired-end sequencing data. The complete plastid genome was 152,605 bp in length, which contained two inverted repeats (IRs) of 24,954 bp separated by a large single-copy (LSC) and a small single copy (SSC) of 84,427 bp and 18,270 bp, respectively. The cpDNA contains 132 genes, comprising 85 protein-coding genes, 37 tRNA genes, 8 rRNA genes. The overall GC content of the plastome is 37.3%. The phylogenetic analysis of 17 selected chloroplast genomes demonstrated that Heteroplexis incana was closely related to Aster indicus.
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spelling pubmed-77064522020-12-22 Complete chloroplast genome sequence of Heteroplexis incana (Asteraceae), a rare species endemic to China Qin, Fang Shi, Yancai Zhang, Ying Wei, Xiao Liu, Bingbing Mitochondrial DNA B Resour Mitogenome Announcement Heteroplexis incana (Asteraceae) is a rare species endemic to China. Here, we report and characterize the complete chloroplast genome sequence of H. incana based on Illumina paired-end sequencing data. The complete plastid genome was 152,605 bp in length, which contained two inverted repeats (IRs) of 24,954 bp separated by a large single-copy (LSC) and a small single copy (SSC) of 84,427 bp and 18,270 bp, respectively. The cpDNA contains 132 genes, comprising 85 protein-coding genes, 37 tRNA genes, 8 rRNA genes. The overall GC content of the plastome is 37.3%. The phylogenetic analysis of 17 selected chloroplast genomes demonstrated that Heteroplexis incana was closely related to Aster indicus. Taylor & Francis 2019-09-17 /pmc/articles/PMC7706452/ /pubmed/33365842 http://dx.doi.org/10.1080/23802359.2019.1666685 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Qin, Fang
Shi, Yancai
Zhang, Ying
Wei, Xiao
Liu, Bingbing
Complete chloroplast genome sequence of Heteroplexis incana (Asteraceae), a rare species endemic to China
title Complete chloroplast genome sequence of Heteroplexis incana (Asteraceae), a rare species endemic to China
title_full Complete chloroplast genome sequence of Heteroplexis incana (Asteraceae), a rare species endemic to China
title_fullStr Complete chloroplast genome sequence of Heteroplexis incana (Asteraceae), a rare species endemic to China
title_full_unstemmed Complete chloroplast genome sequence of Heteroplexis incana (Asteraceae), a rare species endemic to China
title_short Complete chloroplast genome sequence of Heteroplexis incana (Asteraceae), a rare species endemic to China
title_sort complete chloroplast genome sequence of heteroplexis incana (asteraceae), a rare species endemic to china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706452/
https://www.ncbi.nlm.nih.gov/pubmed/33365842
http://dx.doi.org/10.1080/23802359.2019.1666685
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