Cargando…

Complete mitochondrail genome of Corydoras panda (Teleostei, Siluriformes, Callichthyidae, Corydoradinae)

We reported the complete mitochondrial genome yielded by next-generation sequencing of Corydoras panda in this study. The total length of the mitochondrial genome is 16,611 bp, with the base composition of 32.50% A, 26.30% T, 26.10% C, and 15.10% G, respectively. It contains two ribosomal RNA genes,...

Descripción completa

Detalles Bibliográficos
Autores principales: Liu, Qiaolin, Liu, Yi, Xiao, Tiaoyi, Xu, Baohong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706455/
https://www.ncbi.nlm.nih.gov/pubmed/33365771
http://dx.doi.org/10.1080/23802359.2019.1660253
_version_ 1783617156845404160
author Liu, Qiaolin
Liu, Yi
Xiao, Tiaoyi
Xu, Baohong
author_facet Liu, Qiaolin
Liu, Yi
Xiao, Tiaoyi
Xu, Baohong
author_sort Liu, Qiaolin
collection PubMed
description We reported the complete mitochondrial genome yielded by next-generation sequencing of Corydoras panda in this study. The total length of the mitochondrial genome is 16,611 bp, with the base composition of 32.50% A, 26.30% T, 26.10% C, and 15.10% G, respectively. It contains two ribosomal RNA genes, 13 protein-coding genes, 22 transfer RNA genes, and a major non-coding control region (D-loop region). The arrangement of these genes is the same as that found in the Siluriformes. The complete mitogenomes of C. panda and other 18 species from Siluriformes were used for phylogenetic analysis using Neighbor-Joining method. The topology demonstrated that all species belong to nine genera are divided into three groups (Siluridae, Loricariidae, and Callichthyidae), and the C. panda was clustered with other species from genus Corydoras. Corydoras panda external morphological feature classification is consistent with the molecular classification results, so the information of the mitogenome could be used for future identification of Corydoras species.
format Online
Article
Text
id pubmed-7706455
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77064552020-12-22 Complete mitochondrail genome of Corydoras panda (Teleostei, Siluriformes, Callichthyidae, Corydoradinae) Liu, Qiaolin Liu, Yi Xiao, Tiaoyi Xu, Baohong Mitochondrial DNA B Resour Mitogenome Announcement We reported the complete mitochondrial genome yielded by next-generation sequencing of Corydoras panda in this study. The total length of the mitochondrial genome is 16,611 bp, with the base composition of 32.50% A, 26.30% T, 26.10% C, and 15.10% G, respectively. It contains two ribosomal RNA genes, 13 protein-coding genes, 22 transfer RNA genes, and a major non-coding control region (D-loop region). The arrangement of these genes is the same as that found in the Siluriformes. The complete mitogenomes of C. panda and other 18 species from Siluriformes were used for phylogenetic analysis using Neighbor-Joining method. The topology demonstrated that all species belong to nine genera are divided into three groups (Siluridae, Loricariidae, and Callichthyidae), and the C. panda was clustered with other species from genus Corydoras. Corydoras panda external morphological feature classification is consistent with the molecular classification results, so the information of the mitogenome could be used for future identification of Corydoras species. Taylor & Francis 2019-09-03 /pmc/articles/PMC7706455/ /pubmed/33365771 http://dx.doi.org/10.1080/23802359.2019.1660253 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Liu, Qiaolin
Liu, Yi
Xiao, Tiaoyi
Xu, Baohong
Complete mitochondrail genome of Corydoras panda (Teleostei, Siluriformes, Callichthyidae, Corydoradinae)
title Complete mitochondrail genome of Corydoras panda (Teleostei, Siluriformes, Callichthyidae, Corydoradinae)
title_full Complete mitochondrail genome of Corydoras panda (Teleostei, Siluriformes, Callichthyidae, Corydoradinae)
title_fullStr Complete mitochondrail genome of Corydoras panda (Teleostei, Siluriformes, Callichthyidae, Corydoradinae)
title_full_unstemmed Complete mitochondrail genome of Corydoras panda (Teleostei, Siluriformes, Callichthyidae, Corydoradinae)
title_short Complete mitochondrail genome of Corydoras panda (Teleostei, Siluriformes, Callichthyidae, Corydoradinae)
title_sort complete mitochondrail genome of corydoras panda (teleostei, siluriformes, callichthyidae, corydoradinae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706455/
https://www.ncbi.nlm.nih.gov/pubmed/33365771
http://dx.doi.org/10.1080/23802359.2019.1660253
work_keys_str_mv AT liuqiaolin completemitochondrailgenomeofcorydoraspandateleosteisiluriformescallichthyidaecorydoradinae
AT liuyi completemitochondrailgenomeofcorydoraspandateleosteisiluriformescallichthyidaecorydoradinae
AT xiaotiaoyi completemitochondrailgenomeofcorydoraspandateleosteisiluriformescallichthyidaecorydoradinae
AT xubaohong completemitochondrailgenomeofcorydoraspandateleosteisiluriformescallichthyidaecorydoradinae