Characterization of the complete mitochondrial genome of a holothurians species: Holothuria hilla (Holothuroidea: Holothuriidae)

Mitochondrial genome sequence is a great potential method to both resolve disputed taxonomic issues and to infer phylogenetic relationships among holothurians. In this study, we present the complete mitochondrial genome of Holothuria hilla which was 15,744 bp in length, containing 13 protein-coding...

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Autores principales: Yang, Qiuhua, Lin, Qi, Yang, Fuyuan, Wu, Jianshao, Lu, Zhen, Li, Shengkang, Zhou, Chen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706501/
https://www.ncbi.nlm.nih.gov/pubmed/33365756
http://dx.doi.org/10.1080/23802359.2019.1660267
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author Yang, Qiuhua
Lin, Qi
Yang, Fuyuan
Wu, Jianshao
Lu, Zhen
Li, Shengkang
Zhou, Chen
author_facet Yang, Qiuhua
Lin, Qi
Yang, Fuyuan
Wu, Jianshao
Lu, Zhen
Li, Shengkang
Zhou, Chen
author_sort Yang, Qiuhua
collection PubMed
description Mitochondrial genome sequence is a great potential method to both resolve disputed taxonomic issues and to infer phylogenetic relationships among holothurians. In this study, we present the complete mitochondrial genome of Holothuria hilla which was 15,744 bp in length, containing 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and a putative control region. The gene content and arrangement were typical for Holothuroidea ground pattern. The overall base composition was 32.43% A, 27.20% T, 24.35% C and 16.02% G, showing a bias toward A + T (59.63%). The maximum-likelihood tree based on the concatenated 13 protein-coding genes revealed the phylogenetic relationships among the Holothuroidea species.
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spelling pubmed-77065012020-12-22 Characterization of the complete mitochondrial genome of a holothurians species: Holothuria hilla (Holothuroidea: Holothuriidae) Yang, Qiuhua Lin, Qi Yang, Fuyuan Wu, Jianshao Lu, Zhen Li, Shengkang Zhou, Chen Mitochondrial DNA B Resour Mitogenome Announcement Mitochondrial genome sequence is a great potential method to both resolve disputed taxonomic issues and to infer phylogenetic relationships among holothurians. In this study, we present the complete mitochondrial genome of Holothuria hilla which was 15,744 bp in length, containing 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and a putative control region. The gene content and arrangement were typical for Holothuroidea ground pattern. The overall base composition was 32.43% A, 27.20% T, 24.35% C and 16.02% G, showing a bias toward A + T (59.63%). The maximum-likelihood tree based on the concatenated 13 protein-coding genes revealed the phylogenetic relationships among the Holothuroidea species. Taylor & Francis 2019-09-03 /pmc/articles/PMC7706501/ /pubmed/33365756 http://dx.doi.org/10.1080/23802359.2019.1660267 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Yang, Qiuhua
Lin, Qi
Yang, Fuyuan
Wu, Jianshao
Lu, Zhen
Li, Shengkang
Zhou, Chen
Characterization of the complete mitochondrial genome of a holothurians species: Holothuria hilla (Holothuroidea: Holothuriidae)
title Characterization of the complete mitochondrial genome of a holothurians species: Holothuria hilla (Holothuroidea: Holothuriidae)
title_full Characterization of the complete mitochondrial genome of a holothurians species: Holothuria hilla (Holothuroidea: Holothuriidae)
title_fullStr Characterization of the complete mitochondrial genome of a holothurians species: Holothuria hilla (Holothuroidea: Holothuriidae)
title_full_unstemmed Characterization of the complete mitochondrial genome of a holothurians species: Holothuria hilla (Holothuroidea: Holothuriidae)
title_short Characterization of the complete mitochondrial genome of a holothurians species: Holothuria hilla (Holothuroidea: Holothuriidae)
title_sort characterization of the complete mitochondrial genome of a holothurians species: holothuria hilla (holothuroidea: holothuriidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706501/
https://www.ncbi.nlm.nih.gov/pubmed/33365756
http://dx.doi.org/10.1080/23802359.2019.1660267
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