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The complete chloroplast genome sequence of Scurrula parasitica (Loranthaceae)
Scurrula parasitica Linn. is a hemiparasitic shrub distributed in southern China and Southeast Asian countries. Here, we report and characterize the complete plastid genome sequence of S. parasitica in an effort to provide genomic resources useful for the phylogenetic studies for Santalales. The com...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706522/ https://www.ncbi.nlm.nih.gov/pubmed/33365841 http://dx.doi.org/10.1080/23802359.2019.1666684 |
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author | Shi, Yancai Zhang, Ying Liu, Bingbing |
author_facet | Shi, Yancai Zhang, Ying Liu, Bingbing |
author_sort | Shi, Yancai |
collection | PubMed |
description | Scurrula parasitica Linn. is a hemiparasitic shrub distributed in southern China and Southeast Asian countries. Here, we report and characterize the complete plastid genome sequence of S. parasitica in an effort to provide genomic resources useful for the phylogenetic studies for Santalales. The complete chloroplast genome of S. parasitica was 122,599 bp in total sequence length, which containing two inverted repeats (IRs) of 23,137 bp separated by a large single-copy (LSC) and a small single copy (SSC) of 70,237 bp and 6,088 bp, respectively. The cpDNA contains 105 genes, comprising 67 protein-coding genes, 30 tRNA genes, 8 rRNA genes. The overall GC content of the plastome is 37.2%. Phylogenetic analysis with 17 species revealed that S. parasitica was closely related to the congeneric species S. notothixoides. |
format | Online Article Text |
id | pubmed-7706522 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77065222020-12-22 The complete chloroplast genome sequence of Scurrula parasitica (Loranthaceae) Shi, Yancai Zhang, Ying Liu, Bingbing Mitochondrial DNA B Resour Mitogenome Announcement Scurrula parasitica Linn. is a hemiparasitic shrub distributed in southern China and Southeast Asian countries. Here, we report and characterize the complete plastid genome sequence of S. parasitica in an effort to provide genomic resources useful for the phylogenetic studies for Santalales. The complete chloroplast genome of S. parasitica was 122,599 bp in total sequence length, which containing two inverted repeats (IRs) of 23,137 bp separated by a large single-copy (LSC) and a small single copy (SSC) of 70,237 bp and 6,088 bp, respectively. The cpDNA contains 105 genes, comprising 67 protein-coding genes, 30 tRNA genes, 8 rRNA genes. The overall GC content of the plastome is 37.2%. Phylogenetic analysis with 17 species revealed that S. parasitica was closely related to the congeneric species S. notothixoides. Taylor & Francis 2019-09-17 /pmc/articles/PMC7706522/ /pubmed/33365841 http://dx.doi.org/10.1080/23802359.2019.1666684 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Shi, Yancai Zhang, Ying Liu, Bingbing The complete chloroplast genome sequence of Scurrula parasitica (Loranthaceae) |
title | The complete chloroplast genome sequence of Scurrula parasitica (Loranthaceae) |
title_full | The complete chloroplast genome sequence of Scurrula parasitica (Loranthaceae) |
title_fullStr | The complete chloroplast genome sequence of Scurrula parasitica (Loranthaceae) |
title_full_unstemmed | The complete chloroplast genome sequence of Scurrula parasitica (Loranthaceae) |
title_short | The complete chloroplast genome sequence of Scurrula parasitica (Loranthaceae) |
title_sort | complete chloroplast genome sequence of scurrula parasitica (loranthaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706522/ https://www.ncbi.nlm.nih.gov/pubmed/33365841 http://dx.doi.org/10.1080/23802359.2019.1666684 |
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