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The complete mitochondrial genome of Cochliobolus miyabeanus (Dothideomycetes, Pleosporaceae) causing brown spot disease of rice

Cochliobolus miyabeanus is known as a significant causal agent in relation to brown spot disease of rice and causes significant yield losses. In the present study, the complete mitochondrial genome was determined using next-generation sequencing technology. This complete mitogenome is a circular mol...

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Autores principales: Deng, Gang, Zou, Qian, Chen, Yue, Wang, Lingxian, Huang, Ge, Cui, Yongzhen, Ding, Mingliang, Wang, Yuanbing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706553/
https://www.ncbi.nlm.nih.gov/pubmed/33365749
http://dx.doi.org/10.1080/23802359.2019.1660273
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author Deng, Gang
Zou, Qian
Chen, Yue
Wang, Lingxian
Huang, Ge
Cui, Yongzhen
Ding, Mingliang
Wang, Yuanbing
author_facet Deng, Gang
Zou, Qian
Chen, Yue
Wang, Lingxian
Huang, Ge
Cui, Yongzhen
Ding, Mingliang
Wang, Yuanbing
author_sort Deng, Gang
collection PubMed
description Cochliobolus miyabeanus is known as a significant causal agent in relation to brown spot disease of rice and causes significant yield losses. In the present study, the complete mitochondrial genome was determined using next-generation sequencing technology. This complete mitogenome is a circular molecule of 124,887 bp in length. It contains 13 conserved protein-coding genes, 21 transfer RNA genes, 2 ribosomal RNA genes and 9 open reading frames. The overall base composition of C. miyabeanus is 35.4% A, 34.4% T, 14.4% C, 15.8% G, with a CG content of 30.2%. Phylogenetic analysis based on concatenated protein genes from 15 taxa within Pezizomycotina showed that C. miyabeanus is closely related to Bipolaris cookei in the family Pleosporaceae (Dothideomycetes, Pleosporales). This work would facilitate the understanding of systematics and evolutionary biology of phytopathogenic fungi.
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spelling pubmed-77065532020-12-22 The complete mitochondrial genome of Cochliobolus miyabeanus (Dothideomycetes, Pleosporaceae) causing brown spot disease of rice Deng, Gang Zou, Qian Chen, Yue Wang, Lingxian Huang, Ge Cui, Yongzhen Ding, Mingliang Wang, Yuanbing Mitochondrial DNA B Resour Mitogenome Announcement Cochliobolus miyabeanus is known as a significant causal agent in relation to brown spot disease of rice and causes significant yield losses. In the present study, the complete mitochondrial genome was determined using next-generation sequencing technology. This complete mitogenome is a circular molecule of 124,887 bp in length. It contains 13 conserved protein-coding genes, 21 transfer RNA genes, 2 ribosomal RNA genes and 9 open reading frames. The overall base composition of C. miyabeanus is 35.4% A, 34.4% T, 14.4% C, 15.8% G, with a CG content of 30.2%. Phylogenetic analysis based on concatenated protein genes from 15 taxa within Pezizomycotina showed that C. miyabeanus is closely related to Bipolaris cookei in the family Pleosporaceae (Dothideomycetes, Pleosporales). This work would facilitate the understanding of systematics and evolutionary biology of phytopathogenic fungi. Taylor & Francis 2019-09-02 /pmc/articles/PMC7706553/ /pubmed/33365749 http://dx.doi.org/10.1080/23802359.2019.1660273 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Deng, Gang
Zou, Qian
Chen, Yue
Wang, Lingxian
Huang, Ge
Cui, Yongzhen
Ding, Mingliang
Wang, Yuanbing
The complete mitochondrial genome of Cochliobolus miyabeanus (Dothideomycetes, Pleosporaceae) causing brown spot disease of rice
title The complete mitochondrial genome of Cochliobolus miyabeanus (Dothideomycetes, Pleosporaceae) causing brown spot disease of rice
title_full The complete mitochondrial genome of Cochliobolus miyabeanus (Dothideomycetes, Pleosporaceae) causing brown spot disease of rice
title_fullStr The complete mitochondrial genome of Cochliobolus miyabeanus (Dothideomycetes, Pleosporaceae) causing brown spot disease of rice
title_full_unstemmed The complete mitochondrial genome of Cochliobolus miyabeanus (Dothideomycetes, Pleosporaceae) causing brown spot disease of rice
title_short The complete mitochondrial genome of Cochliobolus miyabeanus (Dothideomycetes, Pleosporaceae) causing brown spot disease of rice
title_sort complete mitochondrial genome of cochliobolus miyabeanus (dothideomycetes, pleosporaceae) causing brown spot disease of rice
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706553/
https://www.ncbi.nlm.nih.gov/pubmed/33365749
http://dx.doi.org/10.1080/23802359.2019.1660273
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