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Characterization of the complete chloroplast genome of Chinese rose, Rosa chinensis (Rosaceae: Rosa)

Rosa chinensis known commonly as the Chinese rose, is a member of the genus Rosa native to Southwest China. In this study, the complete chloroplast genome of R. chinensis was sequenced and analyzed. Structural analysis of the complete chloroplast (cp) genome of R. chinensis that exhibits a typical q...

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Autores principales: Lin, Wang, Huang, Jing, Xue, Meixiang, Wang, Xiumei, Wang, Chunhua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706574/
https://www.ncbi.nlm.nih.gov/pubmed/33365821
http://dx.doi.org/10.1080/23802359.2019.1664350
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author Lin, Wang
Huang, Jing
Xue, Meixiang
Wang, Xiumei
Wang, Chunhua
author_facet Lin, Wang
Huang, Jing
Xue, Meixiang
Wang, Xiumei
Wang, Chunhua
author_sort Lin, Wang
collection PubMed
description Rosa chinensis known commonly as the Chinese rose, is a member of the genus Rosa native to Southwest China. In this study, the complete chloroplast genome of R. chinensis was sequenced and analyzed. Structural analysis of the complete chloroplast (cp) genome of R. chinensis that exhibits a typical quadripartite circular structure with 155,097 bp in size, which contains a large single-copy region (LSC) of 85,911 bp, a small single-copy region (SSC) of 17,270 bp and a pair of inverted repeat (IR) regions of 25,958 bp in each one. The cp genome of R. chinensis contains 130 genes, including 85 protein-coding genes, 37 tRNA genes and 8 rRNA genes. The phylogenetic Maximum-Likelihood (ML) analysis result shown that R. chinensis and Rosa odorata formed an independent clade with a 100% bootstrap support in phylogenetic relationship.
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spelling pubmed-77065742020-12-22 Characterization of the complete chloroplast genome of Chinese rose, Rosa chinensis (Rosaceae: Rosa) Lin, Wang Huang, Jing Xue, Meixiang Wang, Xiumei Wang, Chunhua Mitochondrial DNA B Resour Mitogenome Announcement Rosa chinensis known commonly as the Chinese rose, is a member of the genus Rosa native to Southwest China. In this study, the complete chloroplast genome of R. chinensis was sequenced and analyzed. Structural analysis of the complete chloroplast (cp) genome of R. chinensis that exhibits a typical quadripartite circular structure with 155,097 bp in size, which contains a large single-copy region (LSC) of 85,911 bp, a small single-copy region (SSC) of 17,270 bp and a pair of inverted repeat (IR) regions of 25,958 bp in each one. The cp genome of R. chinensis contains 130 genes, including 85 protein-coding genes, 37 tRNA genes and 8 rRNA genes. The phylogenetic Maximum-Likelihood (ML) analysis result shown that R. chinensis and Rosa odorata formed an independent clade with a 100% bootstrap support in phylogenetic relationship. Taylor & Francis 2019-09-12 /pmc/articles/PMC7706574/ /pubmed/33365821 http://dx.doi.org/10.1080/23802359.2019.1664350 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Lin, Wang
Huang, Jing
Xue, Meixiang
Wang, Xiumei
Wang, Chunhua
Characterization of the complete chloroplast genome of Chinese rose, Rosa chinensis (Rosaceae: Rosa)
title Characterization of the complete chloroplast genome of Chinese rose, Rosa chinensis (Rosaceae: Rosa)
title_full Characterization of the complete chloroplast genome of Chinese rose, Rosa chinensis (Rosaceae: Rosa)
title_fullStr Characterization of the complete chloroplast genome of Chinese rose, Rosa chinensis (Rosaceae: Rosa)
title_full_unstemmed Characterization of the complete chloroplast genome of Chinese rose, Rosa chinensis (Rosaceae: Rosa)
title_short Characterization of the complete chloroplast genome of Chinese rose, Rosa chinensis (Rosaceae: Rosa)
title_sort characterization of the complete chloroplast genome of chinese rose, rosa chinensis (rosaceae: rosa)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706574/
https://www.ncbi.nlm.nih.gov/pubmed/33365821
http://dx.doi.org/10.1080/23802359.2019.1664350
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