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Characterization of the complete chloroplast genome of Taibaisanqi (Tongoloa silaifolia)

Tongoloa silaifolia, known as a traditional Chinese medicine Taibaisanqi, is a perennial herb of Apiaceae. In this study, the complete chloroplast genome of T. silaifolia was determined through Illumina sequencing method. The chloroplast genome of T. silaifolia was 161,122 bp in length and contained...

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Autores principales: Gui, Ling-Jian, Xie, Deng-Feng, Jia, Sheng-bin, Li, Hao, Xiao, Yan-Ping, He, Xing-Jin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706610/
https://www.ncbi.nlm.nih.gov/pubmed/33365788
http://dx.doi.org/10.1080/23802359.2019.1661299
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author Gui, Ling-Jian
Xie, Deng-Feng
Jia, Sheng-bin
Li, Hao
Xiao, Yan-Ping
He, Xing-Jin
author_facet Gui, Ling-Jian
Xie, Deng-Feng
Jia, Sheng-bin
Li, Hao
Xiao, Yan-Ping
He, Xing-Jin
author_sort Gui, Ling-Jian
collection PubMed
description Tongoloa silaifolia, known as a traditional Chinese medicine Taibaisanqi, is a perennial herb of Apiaceae. In this study, the complete chloroplast genome of T. silaifolia was determined through Illumina sequencing method. The chloroplast genome of T. silaifolia was 161,122 bp in length and contained a pair of IR regions (30,824 bp) separated by a small single-copy region (17,553 bp) and a large single-copy region (81,921 bp). This chloroplast genome is encoded with 137 genes including 92 CDS, 37 tRNA genes, and 8 rRNA genes. The overall GC content of T. silaifolia cp genome is 37.7%. By phylogenetic analysis using maximum likelihood method, T. silaifolia showed the closest relationship with Chuanminshen violaceum and Hansenia species.
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spelling pubmed-77066102020-12-22 Characterization of the complete chloroplast genome of Taibaisanqi (Tongoloa silaifolia) Gui, Ling-Jian Xie, Deng-Feng Jia, Sheng-bin Li, Hao Xiao, Yan-Ping He, Xing-Jin Mitochondrial DNA B Resour Mitogenome Announcement Tongoloa silaifolia, known as a traditional Chinese medicine Taibaisanqi, is a perennial herb of Apiaceae. In this study, the complete chloroplast genome of T. silaifolia was determined through Illumina sequencing method. The chloroplast genome of T. silaifolia was 161,122 bp in length and contained a pair of IR regions (30,824 bp) separated by a small single-copy region (17,553 bp) and a large single-copy region (81,921 bp). This chloroplast genome is encoded with 137 genes including 92 CDS, 37 tRNA genes, and 8 rRNA genes. The overall GC content of T. silaifolia cp genome is 37.7%. By phylogenetic analysis using maximum likelihood method, T. silaifolia showed the closest relationship with Chuanminshen violaceum and Hansenia species. Taylor & Francis 2019-09-06 /pmc/articles/PMC7706610/ /pubmed/33365788 http://dx.doi.org/10.1080/23802359.2019.1661299 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Gui, Ling-Jian
Xie, Deng-Feng
Jia, Sheng-bin
Li, Hao
Xiao, Yan-Ping
He, Xing-Jin
Characterization of the complete chloroplast genome of Taibaisanqi (Tongoloa silaifolia)
title Characterization of the complete chloroplast genome of Taibaisanqi (Tongoloa silaifolia)
title_full Characterization of the complete chloroplast genome of Taibaisanqi (Tongoloa silaifolia)
title_fullStr Characterization of the complete chloroplast genome of Taibaisanqi (Tongoloa silaifolia)
title_full_unstemmed Characterization of the complete chloroplast genome of Taibaisanqi (Tongoloa silaifolia)
title_short Characterization of the complete chloroplast genome of Taibaisanqi (Tongoloa silaifolia)
title_sort characterization of the complete chloroplast genome of taibaisanqi (tongoloa silaifolia)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706610/
https://www.ncbi.nlm.nih.gov/pubmed/33365788
http://dx.doi.org/10.1080/23802359.2019.1661299
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