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Complete chloroplast genome of Acer tegmentosum and phylogenetic analysis
The aim of the present study was to sequence and analyze the complete plastid genome (i.e. plastome) of Acer tegmentosum Maxim. The plastome of A. tegmentosum was 156,435 bp in length and included both large (86,265 bp) and small (18,102 bp) single-copy regions, which were separated by a pair of ide...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706611/ https://www.ncbi.nlm.nih.gov/pubmed/33365624 http://dx.doi.org/10.1080/23802359.2019.1640646 |
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author | Kim, Sang-Chul Shin, Sookyung Lee, Min-Woo Lee, Jei-Wan |
author_facet | Kim, Sang-Chul Shin, Sookyung Lee, Min-Woo Lee, Jei-Wan |
author_sort | Kim, Sang-Chul |
collection | PubMed |
description | The aim of the present study was to sequence and analyze the complete plastid genome (i.e. plastome) of Acer tegmentosum Maxim. The plastome of A. tegmentosum was 156,435 bp in length and included both large (86,265 bp) and small (18,102 bp) single-copy regions, which were separated by a pair of identical inverted repeats (26,034 bp). The plastome contained 77 unique protein-coding genes, 30 tRNA genes, and four rRNA genes. In addition, the gene order and organization of the A. tegmentosum plastome were consistent with those of plastomes from other members of the Sapindaceae, and the overall GC content of the plastome was 37.8%. A phylogenetic tree that was based on 76 protein-coding genes demonstrated a sister relationship within genus Acer. |
format | Online Article Text |
id | pubmed-7706611 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77066112020-12-22 Complete chloroplast genome of Acer tegmentosum and phylogenetic analysis Kim, Sang-Chul Shin, Sookyung Lee, Min-Woo Lee, Jei-Wan Mitochondrial DNA B Resour Mitogenome Announcement The aim of the present study was to sequence and analyze the complete plastid genome (i.e. plastome) of Acer tegmentosum Maxim. The plastome of A. tegmentosum was 156,435 bp in length and included both large (86,265 bp) and small (18,102 bp) single-copy regions, which were separated by a pair of identical inverted repeats (26,034 bp). The plastome contained 77 unique protein-coding genes, 30 tRNA genes, and four rRNA genes. In addition, the gene order and organization of the A. tegmentosum plastome were consistent with those of plastomes from other members of the Sapindaceae, and the overall GC content of the plastome was 37.8%. A phylogenetic tree that was based on 76 protein-coding genes demonstrated a sister relationship within genus Acer. Taylor & Francis 2019-07-18 /pmc/articles/PMC7706611/ /pubmed/33365624 http://dx.doi.org/10.1080/23802359.2019.1640646 Text en © 2019 National Institute of Forest Science of South Korea. Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Kim, Sang-Chul Shin, Sookyung Lee, Min-Woo Lee, Jei-Wan Complete chloroplast genome of Acer tegmentosum and phylogenetic analysis |
title | Complete chloroplast genome of Acer tegmentosum and phylogenetic analysis |
title_full | Complete chloroplast genome of Acer tegmentosum and phylogenetic analysis |
title_fullStr | Complete chloroplast genome of Acer tegmentosum and phylogenetic analysis |
title_full_unstemmed | Complete chloroplast genome of Acer tegmentosum and phylogenetic analysis |
title_short | Complete chloroplast genome of Acer tegmentosum and phylogenetic analysis |
title_sort | complete chloroplast genome of acer tegmentosum and phylogenetic analysis |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706611/ https://www.ncbi.nlm.nih.gov/pubmed/33365624 http://dx.doi.org/10.1080/23802359.2019.1640646 |
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