The complete chloroplast genome sequence of Helicia shweliensis

Helicia shweliensis is a Critically Endangered species endemic to Yunnan, China. In this study, the complete chloroplast genome (cpDNA) sequence of H. shweliensis was determined from Illumina HiSeq pair-end sequencing data. The cpDNA is 157,151 bp in length, contains a large single copy region (LSC)...

Descripción completa

Detalles Bibliográficos
Autores principales: Wang, Yi, Yuan, Xiaolong, Saiyu, Ma, Zhang, Jinfeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706619/
https://www.ncbi.nlm.nih.gov/pubmed/33365608
http://dx.doi.org/10.1080/23802359.2019.1640086
Descripción
Sumario:Helicia shweliensis is a Critically Endangered species endemic to Yunnan, China. In this study, the complete chloroplast genome (cpDNA) sequence of H. shweliensis was determined from Illumina HiSeq pair-end sequencing data. The cpDNA is 157,151 bp in length, contains a large single copy region (LSC) of 85,463 bp and a small single copy region (SSC) of 18,662 bp, which were separated by a pair of inverted repeat (IR) regions of 26,513 bp. The genome contains 131 genes, including 86 protein-coding genes, 8 ribosomal RNA genes, and 37 transfer RNA genes. The overall GC content of the whole genome is 38.1% and the corresponding values of the LSC, SSC, and IR regions are 36.5, 31.8, and 42.9%, respectively. Further, phylogenomic analysis showed that V. paradoxa clustered in a unique clade in order Proteales.

Ejemplares similares