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Complete chloroplast genome sequence of Hedychium coronarium
The first complete chloroplast genome of Hedychium coronarium (Zingiberaceae) was reported in this study. The H. coronarium chloroplast genome was 163,949 bp in length and comprised a pair of inverted repeat (IR) regions of 29,780 bp each, a large single-copy (LSC) region of 88,581 bp and a small si...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706620/ https://www.ncbi.nlm.nih.gov/pubmed/33365737 http://dx.doi.org/10.1080/23802359.2019.1659114 |
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author | Li, Dong-Mei Zhao, Chao-Yi Zhu, Gen-Fa Xu, Ye-Chun |
author_facet | Li, Dong-Mei Zhao, Chao-Yi Zhu, Gen-Fa Xu, Ye-Chun |
author_sort | Li, Dong-Mei |
collection | PubMed |
description | The first complete chloroplast genome of Hedychium coronarium (Zingiberaceae) was reported in this study. The H. coronarium chloroplast genome was 163,949 bp in length and comprised a pair of inverted repeat (IR) regions of 29,780 bp each, a large single-copy (LSC) region of 88,581 bp and a small single-copy (SSC) region of 15,808 bp. It encoded 141 genes, including 87 protein-coding genes (79 PCG species), 46 tRNA genes (28 tRNA species), and eight rRNA genes (four rRNA species). The nucleotide composition was asymmetric (31.68% A, 18.35% C, 17.74% G, 32.23% T) with an overall AT content of 63.92%. Phylogenetic analysis showed that H. coronarium was classified into a monophyletic group within the genus Hedychium in family Zingiberaceae. |
format | Online Article Text |
id | pubmed-7706620 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77066202020-12-22 Complete chloroplast genome sequence of Hedychium coronarium Li, Dong-Mei Zhao, Chao-Yi Zhu, Gen-Fa Xu, Ye-Chun Mitochondrial DNA B Resour Mitogenome Announcement The first complete chloroplast genome of Hedychium coronarium (Zingiberaceae) was reported in this study. The H. coronarium chloroplast genome was 163,949 bp in length and comprised a pair of inverted repeat (IR) regions of 29,780 bp each, a large single-copy (LSC) region of 88,581 bp and a small single-copy (SSC) region of 15,808 bp. It encoded 141 genes, including 87 protein-coding genes (79 PCG species), 46 tRNA genes (28 tRNA species), and eight rRNA genes (four rRNA species). The nucleotide composition was asymmetric (31.68% A, 18.35% C, 17.74% G, 32.23% T) with an overall AT content of 63.92%. Phylogenetic analysis showed that H. coronarium was classified into a monophyletic group within the genus Hedychium in family Zingiberaceae. Taylor & Francis 2019-09-06 /pmc/articles/PMC7706620/ /pubmed/33365737 http://dx.doi.org/10.1080/23802359.2019.1659114 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Li, Dong-Mei Zhao, Chao-Yi Zhu, Gen-Fa Xu, Ye-Chun Complete chloroplast genome sequence of Hedychium coronarium |
title | Complete chloroplast genome sequence of Hedychium coronarium |
title_full | Complete chloroplast genome sequence of Hedychium coronarium |
title_fullStr | Complete chloroplast genome sequence of Hedychium coronarium |
title_full_unstemmed | Complete chloroplast genome sequence of Hedychium coronarium |
title_short | Complete chloroplast genome sequence of Hedychium coronarium |
title_sort | complete chloroplast genome sequence of hedychium coronarium |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706620/ https://www.ncbi.nlm.nih.gov/pubmed/33365737 http://dx.doi.org/10.1080/23802359.2019.1659114 |
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