Characterization of the complete chloroplast genome of Sanming wild banana (Musa itinerans) and phylogenetic relationships

Sanming wild banana (Musa itinerans) is a cold resistant wild banana found in Fujian province of China. In this study, we characterized its complete chloroplast genome using BGISEQ-500 sequencing. The chloroplast genome is 171,815 bp in size, containing a pair of IR regions (35,142 bp), a large sing...

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Autores principales: Zhang, Yong-Yan, Liu, Fan, Tian, Na, Che, Jing-Ru, Sun, Xue-Li, Lai, Zhong-Xiong, Cheng, Chun-Zhen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706688/
https://www.ncbi.nlm.nih.gov/pubmed/33365650
http://dx.doi.org/10.1080/23802359.2019.1642167
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author Zhang, Yong-Yan
Liu, Fan
Tian, Na
Che, Jing-Ru
Sun, Xue-Li
Lai, Zhong-Xiong
Cheng, Chun-Zhen
author_facet Zhang, Yong-Yan
Liu, Fan
Tian, Na
Che, Jing-Ru
Sun, Xue-Li
Lai, Zhong-Xiong
Cheng, Chun-Zhen
author_sort Zhang, Yong-Yan
collection PubMed
description Sanming wild banana (Musa itinerans) is a cold resistant wild banana found in Fujian province of China. In this study, we characterized its complete chloroplast genome using BGISEQ-500 sequencing. The chloroplast genome is 171,815 bp in size, containing a pair of IR regions (35,142 bp), a large single copy region (89,995 bp), and a small single copy region (11,464 bp). The whole chloroplast genome contains 111 unique genes, including 78 protein-coding genes, 29 tRNAs, and 4 rRNAs. Phylogenetic maximum likelihood analysis revealed that Sanming wild banana showed the closest relationship with Musa itinerans that collected from Yunnan Province of China.
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spelling pubmed-77066882020-12-22 Characterization of the complete chloroplast genome of Sanming wild banana (Musa itinerans) and phylogenetic relationships Zhang, Yong-Yan Liu, Fan Tian, Na Che, Jing-Ru Sun, Xue-Li Lai, Zhong-Xiong Cheng, Chun-Zhen Mitochondrial DNA B Resour Mitogenome Announcement Sanming wild banana (Musa itinerans) is a cold resistant wild banana found in Fujian province of China. In this study, we characterized its complete chloroplast genome using BGISEQ-500 sequencing. The chloroplast genome is 171,815 bp in size, containing a pair of IR regions (35,142 bp), a large single copy region (89,995 bp), and a small single copy region (11,464 bp). The whole chloroplast genome contains 111 unique genes, including 78 protein-coding genes, 29 tRNAs, and 4 rRNAs. Phylogenetic maximum likelihood analysis revealed that Sanming wild banana showed the closest relationship with Musa itinerans that collected from Yunnan Province of China. Taylor & Francis 2019-07-17 /pmc/articles/PMC7706688/ /pubmed/33365650 http://dx.doi.org/10.1080/23802359.2019.1642167 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Zhang, Yong-Yan
Liu, Fan
Tian, Na
Che, Jing-Ru
Sun, Xue-Li
Lai, Zhong-Xiong
Cheng, Chun-Zhen
Characterization of the complete chloroplast genome of Sanming wild banana (Musa itinerans) and phylogenetic relationships
title Characterization of the complete chloroplast genome of Sanming wild banana (Musa itinerans) and phylogenetic relationships
title_full Characterization of the complete chloroplast genome of Sanming wild banana (Musa itinerans) and phylogenetic relationships
title_fullStr Characterization of the complete chloroplast genome of Sanming wild banana (Musa itinerans) and phylogenetic relationships
title_full_unstemmed Characterization of the complete chloroplast genome of Sanming wild banana (Musa itinerans) and phylogenetic relationships
title_short Characterization of the complete chloroplast genome of Sanming wild banana (Musa itinerans) and phylogenetic relationships
title_sort characterization of the complete chloroplast genome of sanming wild banana (musa itinerans) and phylogenetic relationships
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706688/
https://www.ncbi.nlm.nih.gov/pubmed/33365650
http://dx.doi.org/10.1080/23802359.2019.1642167
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