Complete chloroplast genome of an orchid species Cymbidium floribundum Lindl

Cymbidium floribundum Lindl. is an ornamental plant and its native range is south China to north Vietnam. Here, we report the complete chloroplast (cp) genome sequence and the cp genome features of C. floribundum, which was assembled and characterized based on Illumina pair-end sequencing data. The...

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Autores principales: Zhang, Guo-Qiang, Liu, Zhong-Jian, Lan, Si-Ren
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706694/
https://www.ncbi.nlm.nih.gov/pubmed/33365802
http://dx.doi.org/10.1080/23802359.2019.1662743
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author Zhang, Guo-Qiang
Liu, Zhong-Jian
Lan, Si-Ren
author_facet Zhang, Guo-Qiang
Liu, Zhong-Jian
Lan, Si-Ren
author_sort Zhang, Guo-Qiang
collection PubMed
description Cymbidium floribundum Lindl. is an ornamental plant and its native range is south China to north Vietnam. Here, we report the complete chloroplast (cp) genome sequence and the cp genome features of C. floribundum, which was assembled and characterized based on Illumina pair-end sequencing data. The complete chloroplast genome was 153998 bp in length. Its structure contained a large single-copy (LSC) region of 84,725 bp and a small single-copy (SSC) region of 19,009 bp, which were separated by a pair of extremely inverted repeats (IRs) of 25,132 bp each. The phylogenetic analysis indicated that C. floribundum was in the basal of subgenus Jenson.
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spelling pubmed-77066942020-12-22 Complete chloroplast genome of an orchid species Cymbidium floribundum Lindl Zhang, Guo-Qiang Liu, Zhong-Jian Lan, Si-Ren Mitochondrial DNA B Resour Mitogenome Announcement Cymbidium floribundum Lindl. is an ornamental plant and its native range is south China to north Vietnam. Here, we report the complete chloroplast (cp) genome sequence and the cp genome features of C. floribundum, which was assembled and characterized based on Illumina pair-end sequencing data. The complete chloroplast genome was 153998 bp in length. Its structure contained a large single-copy (LSC) region of 84,725 bp and a small single-copy (SSC) region of 19,009 bp, which were separated by a pair of extremely inverted repeats (IRs) of 25,132 bp each. The phylogenetic analysis indicated that C. floribundum was in the basal of subgenus Jenson. Taylor & Francis 2019-09-06 /pmc/articles/PMC7706694/ /pubmed/33365802 http://dx.doi.org/10.1080/23802359.2019.1662743 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Zhang, Guo-Qiang
Liu, Zhong-Jian
Lan, Si-Ren
Complete chloroplast genome of an orchid species Cymbidium floribundum Lindl
title Complete chloroplast genome of an orchid species Cymbidium floribundum Lindl
title_full Complete chloroplast genome of an orchid species Cymbidium floribundum Lindl
title_fullStr Complete chloroplast genome of an orchid species Cymbidium floribundum Lindl
title_full_unstemmed Complete chloroplast genome of an orchid species Cymbidium floribundum Lindl
title_short Complete chloroplast genome of an orchid species Cymbidium floribundum Lindl
title_sort complete chloroplast genome of an orchid species cymbidium floribundum lindl
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706694/
https://www.ncbi.nlm.nih.gov/pubmed/33365802
http://dx.doi.org/10.1080/23802359.2019.1662743
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