The complete chloroplast genome of Vanilla shenzhenica (Orchidaceae)

Vanilla shenzhenica Z.J.Liu & S.C.Chen is a new species of orchid found in Shenzhen, South China for the first time. Here we report the complete chloroplast (cp) genome sequence and the features of V. shenzhenica. Its cp genome sequence was 151,537 bp, including one large single-copy region (LSC...

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Autores principales: Li, Ting-Zhang, Chen, Li-Jun, Wang, Meng, Chen, Jian-Bing, Huang, Jie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2019
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706789/
https://www.ncbi.nlm.nih.gov/pubmed/33365648
http://dx.doi.org/10.1080/23802359.2019.1642165
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author Li, Ting-Zhang
Chen, Li-Jun
Wang, Meng
Chen, Jian-Bing
Huang, Jie
author_facet Li, Ting-Zhang
Chen, Li-Jun
Wang, Meng
Chen, Jian-Bing
Huang, Jie
author_sort Li, Ting-Zhang
collection PubMed
description Vanilla shenzhenica Z.J.Liu & S.C.Chen is a new species of orchid found in Shenzhen, South China for the first time. Here we report the complete chloroplast (cp) genome sequence and the features of V. shenzhenica. Its cp genome sequence was 151,537 bp, including one large single-copy region (LSC, 87,487 bp), one small single-copy region (SSC, 19,172 bp), and two inverted repeat regions (IRs, 22,439 bp). It encoded 123 genes, of which 104 were unique genes (69 protein-coding genes, 31 tRNAs and 4 rRNAs). The phylogenetic relationships show that V. shenzhenica is sister with V. aphylla.
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spelling pubmed-77067892020-12-22 The complete chloroplast genome of Vanilla shenzhenica (Orchidaceae) Li, Ting-Zhang Chen, Li-Jun Wang, Meng Chen, Jian-Bing Huang, Jie Mitochondrial DNA B Resour Mitogenome Announcement Vanilla shenzhenica Z.J.Liu & S.C.Chen is a new species of orchid found in Shenzhen, South China for the first time. Here we report the complete chloroplast (cp) genome sequence and the features of V. shenzhenica. Its cp genome sequence was 151,537 bp, including one large single-copy region (LSC, 87,487 bp), one small single-copy region (SSC, 19,172 bp), and two inverted repeat regions (IRs, 22,439 bp). It encoded 123 genes, of which 104 were unique genes (69 protein-coding genes, 31 tRNAs and 4 rRNAs). The phylogenetic relationships show that V. shenzhenica is sister with V. aphylla. Taylor & Francis 2019-07-17 /pmc/articles/PMC7706789/ /pubmed/33365648 http://dx.doi.org/10.1080/23802359.2019.1642165 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Li, Ting-Zhang
Chen, Li-Jun
Wang, Meng
Chen, Jian-Bing
Huang, Jie
The complete chloroplast genome of Vanilla shenzhenica (Orchidaceae)
title The complete chloroplast genome of Vanilla shenzhenica (Orchidaceae)
title_full The complete chloroplast genome of Vanilla shenzhenica (Orchidaceae)
title_fullStr The complete chloroplast genome of Vanilla shenzhenica (Orchidaceae)
title_full_unstemmed The complete chloroplast genome of Vanilla shenzhenica (Orchidaceae)
title_short The complete chloroplast genome of Vanilla shenzhenica (Orchidaceae)
title_sort complete chloroplast genome of vanilla shenzhenica (orchidaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706789/
https://www.ncbi.nlm.nih.gov/pubmed/33365648
http://dx.doi.org/10.1080/23802359.2019.1642165
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