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Characterization of the complete chloroplast genome of Pterygocalyx volubilis (Gentianaceae)
Pterygocalyx volubilis Maxim. (Gentianaceae) is a traditional Chinese medicine, and its whole grass is used in the treatment of pulmonary tuberculosis and other conditions. Here, the complete chloroplast genome sequence of P. volubilis was reported based on the Illumina HiSeq Platform. The chloropla...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706796/ https://www.ncbi.nlm.nih.gov/pubmed/33365634 http://dx.doi.org/10.1080/23802359.2019.1640644 |
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author | Wang, Jiuli Cao, Qian Wang, Kezhou Xing, Rui Wang, Lirong Zhou, Dangwei |
author_facet | Wang, Jiuli Cao, Qian Wang, Kezhou Xing, Rui Wang, Lirong Zhou, Dangwei |
author_sort | Wang, Jiuli |
collection | PubMed |
description | Pterygocalyx volubilis Maxim. (Gentianaceae) is a traditional Chinese medicine, and its whole grass is used in the treatment of pulmonary tuberculosis and other conditions. Here, the complete chloroplast genome sequence of P. volubilis was reported based on the Illumina HiSeq Platform. The chloroplast genome genome is 154,365 bp in length, containing a pair of inverted repeated (IR) regions (25,928 bp) that are separated by a large single copy (LSC) region of 84,033 bp, and a small single copy (SSC) region of 18,476 bp. Moreover, a total of 130 functional genes were annotated, including 85 protein-coding genes, 37 tRNA genes, and eight rRNA genes. In the maximum-likelihood (ML) phylogenetic tree, Pterygocalyx clustered with the genus Swertia. This sequenced chloroplast genome of P. volubilis supports that Pterygocalyx belongs to subtribe Swertiinae. |
format | Online Article Text |
id | pubmed-7706796 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77067962020-12-22 Characterization of the complete chloroplast genome of Pterygocalyx volubilis (Gentianaceae) Wang, Jiuli Cao, Qian Wang, Kezhou Xing, Rui Wang, Lirong Zhou, Dangwei Mitochondrial DNA B Resour Mitogenome Announcement Pterygocalyx volubilis Maxim. (Gentianaceae) is a traditional Chinese medicine, and its whole grass is used in the treatment of pulmonary tuberculosis and other conditions. Here, the complete chloroplast genome sequence of P. volubilis was reported based on the Illumina HiSeq Platform. The chloroplast genome genome is 154,365 bp in length, containing a pair of inverted repeated (IR) regions (25,928 bp) that are separated by a large single copy (LSC) region of 84,033 bp, and a small single copy (SSC) region of 18,476 bp. Moreover, a total of 130 functional genes were annotated, including 85 protein-coding genes, 37 tRNA genes, and eight rRNA genes. In the maximum-likelihood (ML) phylogenetic tree, Pterygocalyx clustered with the genus Swertia. This sequenced chloroplast genome of P. volubilis supports that Pterygocalyx belongs to subtribe Swertiinae. Taylor & Francis 2019-07-16 /pmc/articles/PMC7706796/ /pubmed/33365634 http://dx.doi.org/10.1080/23802359.2019.1640644 Text en © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Wang, Jiuli Cao, Qian Wang, Kezhou Xing, Rui Wang, Lirong Zhou, Dangwei Characterization of the complete chloroplast genome of Pterygocalyx volubilis (Gentianaceae) |
title | Characterization of the complete chloroplast genome of Pterygocalyx volubilis (Gentianaceae) |
title_full | Characterization of the complete chloroplast genome of Pterygocalyx volubilis (Gentianaceae) |
title_fullStr | Characterization of the complete chloroplast genome of Pterygocalyx volubilis (Gentianaceae) |
title_full_unstemmed | Characterization of the complete chloroplast genome of Pterygocalyx volubilis (Gentianaceae) |
title_short | Characterization of the complete chloroplast genome of Pterygocalyx volubilis (Gentianaceae) |
title_sort | characterization of the complete chloroplast genome of pterygocalyx volubilis (gentianaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706796/ https://www.ncbi.nlm.nih.gov/pubmed/33365634 http://dx.doi.org/10.1080/23802359.2019.1640644 |
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